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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03577 and MPMX19_03578 are separated by 92 nucleotides
MPMX19_03578 and MPMX19_03579 are separated by 7 nucleotides
MPMX19_03579 and MPMX19_03580 are separated by 3 nucleotides
MPMX19_03580 and MPMX19_03581 are separated by 92 nucleotides
MPMX19_03577: MPMX19_03577 - Pyridoxine 4-dehydrogenase, at 998,489 to 999,379
_03577
MPMX19_03578: MPMX19_03578 - HTH-type transcriptional regulator PgrR, at 999,472 to 1,000,377
_03578
MPMX19_03579: MPMX19_03579 - Sensor histidine kinase RcsC, at 1,000,385 to 1,002,022
_03579
MPMX19_03580: MPMX19_03580 - Circadian clock protein kinase KaiC, at 1,002,026 to 1,003,519
_03580
MPMX19_03581: MPMX19_03581 - Sensor histidine kinase RcsC, at 1,003,612 to 1,006,245
_03581
Group
Condition
MPMX19
_03577
MPMX19
_03578
MPMX19
_03579
MPMX19
_03580
MPMX19
_03581
mgl
MGL
-0.6
+0.2
-0.2
-0.1
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
-0.2
+0.0
-0.1
+0.0
nf
NF
-0.0
+0.1
-0.2
-0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
-0.0
+0.2
+0.2
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.5
+0.1
-0.1
+0.0
nf_with_fulln
NF_with_fullN
-0.1
-0.2
+0.2
-0.4
+0.1
nf_with_fulln
NF_with_fullN
-0.1
-0.3
+0.1
-0.2
+0.1
nl-ccm_agar
NL-CCM_agar
-0.3
-0.3
+0.1
+0.2
-0.0
nf_with_fulln
NF_with_fullN
+0.1
-0.4
+0.0
-0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.1
+0.0
+0.4
-0.5
mgl
MGL
+0.3
+0.0
-0.4
+0.1
-0.3
mgl
MGL
-0.2
-0.4
+0.2
+0.2
-0.0
mgl
MGL
-0.7
+0.1
+0.4
-0.1
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
-0.2
+0.3
+0.0
+0.0
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.1
+0.2
-0.2
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.2
+0.2
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
+0.3
+0.2
-0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.1
-0.2
+0.3
-0.2
nl-ccm
NL-CCM, start OD=0.1
+0.0
-0.2
+0.4
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.4
+0.3
-0.0
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.3
+0.3
-0.0
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.6
-0.1
+0.3
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.1
+0.4
+0.0
+0.2
nl-ccm_agar
NL-CCM_agar
-0.1
+0.4
+0.2
+0.0
+0.0
nl-ccm_agar
NL-CCM_agar
-0.0
+0.5
+0.1
+0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.2
-0.1
+0.3
+0.0
nln
NLN
+0.0
+0.4
+0.1
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.4
+0.3
+0.1
+0.0
mgl
MGL
+0.2
+1.1
-0.3
+0.1
-0.3
mgl
MGL
-0.4
+0.6
+0.3
+0.2
+0.1
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