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Protein
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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03574 and MPMX19_03575 are separated by 12 nucleotides
MPMX19_03575 and MPMX19_03576 are separated by 153 nucleotides
MPMX19_03576 and MPMX19_03577 are separated by 63 nucleotides
MPMX19_03577 and MPMX19_03578 are separated by 92 nucleotides
MPMX19_03574: MPMX19_03574 - Aurachin B dehydrogenase, at 995,399 to 996,286
_03574
MPMX19_03575: MPMX19_03575 - HTH-type transcriptional regulator NimR, at 996,299 to 997,075
_03575
MPMX19_03576: MPMX19_03576 - Fosmidomycin resistance protein, at 997,229 to 998,425
_03576
MPMX19_03577: MPMX19_03577 - Pyridoxine 4-dehydrogenase, at 998,489 to 999,379
_03577
MPMX19_03578: MPMX19_03578 - HTH-type transcriptional regulator PgrR, at 999,472 to 1,000,377
_03578
Group
Condition
MPMX19
_03574
MPMX19
_03575
MPMX19
_03576
MPMX19
_03577
MPMX19
_03578
mgl
MGL
-0.3
-1.4
+0.2
-0.6
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-1.1
-0.0
-0.8
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
-0.4
-0.2
-0.2
-0.1
nl-ccm
NL-CCM, start OD=0.1
-0.4
-0.4
+0.2
-0.5
+0.0
mgl
MGL
-0.9
+0.4
+0.3
-0.2
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.4
-0.2
-0.2
+0.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
-0.6
+0.2
-0.3
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.9
+0.2
+0.1
+0.0
nl-ccm
NL-CCM, start OD=0.3
-0.2
-0.5
+0.2
-0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.3
+0.2
-0.3
-0.2
mgl
MGL
-0.0
-0.2
+0.4
-0.7
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
-1.1
+0.3
+0.0
+0.3
nln
NLN
+0.2
-0.5
+0.1
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.3
+0.1
-0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
-0.1
-0.0
+0.3
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
-0.7
+0.1
-0.0
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
-0.1
+0.3
-0.1
+0.4
nln
NLN
-0.2
-0.2
+0.3
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.5
+0.2
+0.3
-0.3
+0.4
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.4
+0.2
-0.0
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.3
+0.4
-0.1
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.5
+0.1
-0.2
+0.4
mgl
MGL
+0.8
-0.8
+0.2
+0.3
+0.0
nf
NF
+0.1
+0.5
+0.3
-0.1
-0.1
nl-ccm_agar
NL-CCM_agar
-0.1
+0.4
+0.2
-0.1
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
+0.4
+0.3
-0.2
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.3
+0.5
-0.0
+0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.3
+0.3
-0.2
+0.4
mgl
MGL
+0.2
+0.5
+0.3
-0.4
+0.6
mgl
MGL
+0.5
+0.4
+0.1
+0.2
+1.1
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