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Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03557 and MPMX19_03558 are separated by 27 nucleotides
MPMX19_03558 and MPMX19_03559 are separated by 63 nucleotides
MPMX19_03559 and MPMX19_03560 are separated by 226 nucleotides
MPMX19_03560 and MPMX19_03561 are separated by 116 nucleotides
MPMX19_03557: MPMX19_03557 - HTH-type transcriptional regulator CynR, at 977,098 to 977,988
_03557
MPMX19_03558: MPMX19_03558 - hypothetical protein, at 978,016 to 978,396
_03558
MPMX19_03559: MPMX19_03559 - Acetoin dehydrogenase operon transcriptional activator AcoR, at 978,460 to 980,553
_03559
MPMX19_03560: MPMX19_03560 - 60 kDa chaperonin, at 980,780 to 982,420
_03560
MPMX19_03561: MPMX19_03561 - Propane 2-monooxygenase, effector component, at 982,537 to 982,893
_03561
Group
Condition
MPMX19
_03557
MPMX19
_03558
MPMX19
_03559
MPMX19
_03560
MPMX19
_03561
mgl
MGL
-0.7
-0.3
+0.2
-0.3
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
-0.9
-0.1
+0.0
-0.0
nl-ccm
NL-CCM, start OD=0.1
-0.6
-0.4
-0.1
-0.1
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
-0.7
+0.1
-0.2
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.8
-0.1
-0.1
-0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.7
+0.2
-0.2
-0.3
-0.1
nf_with_fulln
NF_with_fullN
-0.3
+0.3
-0.3
-0.1
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
-0.8
-0.0
-0.1
+0.1
nf_with_fulln
NF_with_fullN
-0.2
-0.6
-0.2
+0.4
-0.1
nf_with_fulln
NF_with_fullN
-0.8
-0.3
+0.1
-0.2
+0.3
nf
NF
-0.2
+0.3
-0.3
-0.3
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
+0.4
-0.1
-0.2
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.2
-0.1
-0.1
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.6
-0.2
-0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.2
-0.1
+0.2
+0.1
mgl
MGL
-0.5
+0.6
-0.3
+0.3
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.6
+0.3
+0.2
-0.3
+0.1
nln
NLN
-0.5
-0.2
+0.0
+0.1
+0.3
mgl
MGL
-0.6
+0.2
+0.1
-0.2
+0.3
nl-ccm_agar
NL-CCM_agar
+0.3
-0.6
-0.2
+0.2
+0.1
nln
NLN
-0.5
+0.1
-0.0
+0.3
+0.2
nl-ccm
NL-CCM, start OD=0.3
+0.3
-0.2
+0.1
-0.4
+0.1
nf_with_fulln
NF_with_fullN
-0.5
-0.0
+0.2
-0.1
+0.5
nln
NLN
-0.5
+0.1
+0.1
+0.2
+0.7
nf
NF
-0.2
+0.5
-0.0
-0.1
+0.3
mgl
MGL
+0.3
-0.4
+0.2
+0.4
+0.0
nl-ccm_agar
NL-CCM_agar
+0.3
+0.4
-0.1
-0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.2
+0.1
-0.1
+0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.3
-0.1
+0.3
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.1
+0.3
+0.2
+0.8
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