Fitness for 5 genes in Azospirillum sp. SherDot2

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500 ntMPMX19_03540 and MPMX19_03541 are separated by 4 nucleotidesMPMX19_03541 and MPMX19_03542 overlap by 8 nucleotidesMPMX19_03542 and MPMX19_03543 overlap by 4 nucleotidesMPMX19_03543 and MPMX19_03544 are separated by 19 nucleotides MPMX19_03540: MPMX19_03540 - putative deoxycholate-binding periplasmic protein YgiS, at 959,256 to 960,827 _03540 MPMX19_03541: MPMX19_03541 - Glutathione transport system permease protein GsiC, at 960,832 to 961,779 _03541 MPMX19_03542: MPMX19_03542 - Glutathione transport system permease protein GsiD, at 961,772 to 962,602 _03542 MPMX19_03543: MPMX19_03543 - putative ABC transporter ATP-binding protein YejF, at 962,599 to 964,200 _03543 MPMX19_03544: MPMX19_03544 - N-formyl-4-amino-5-aminomethyl-2- methylpyrimidine deformylase, at 964,220 to 965,431 _03544
Group Condition MPMX19_03540 MPMX19_03541 MPMX19_03542 MPMX19_03543 MPMX19_03544
nf_with10percent_fulln NF_with10percent_fullN +0.0 +0.1 -0.5 -0.5 -0.3
mgl MGL -0.2 -0.2 -0.3 -0.2 -0.3
mgl MGL -0.4 -0.5 +0.1 +0.2 -0.4
nl-ccm NL-CCM, start OD=0.1 -0.1 -0.1 -0.1 -0.4 -0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 -0.1 -0.2 -0.2 -0.0
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.1 -0.2 -0.2 +0.1 -0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.0 -0.1 +0.1 -0.5 -0.1
nl-ccm_agar NL-CCM_agar +0.0 -0.2 +0.1 -0.3 -0.2
nl-ccm_agar NL-CCM_agar -0.1 -0.1 +0.1 -0.4 -0.1
nl-ccm; spin-x control NL-CCM; spin-x control -0.0 +0.1 -0.2 -0.4 +0.0
mgl MGL -0.3 +0.4 +0.1 +0.2 -0.8
mgl MGL +0.1 -0.7 +0.1 +0.3 -0.2
nl-ccm NL-CCM, start OD=0.3 +0.1 -0.2 +0.1 -0.4 +0.1
nln NLN +0.1 -0.3 -0.1 +0.3 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 -0.1 -0.1 +0.3 +0.1
nf_with_fulln NF_with_fullN +0.1 +0.0 -0.1 +0.4 -0.3
nf NF +0.0 +0.1 +0.5 -0.2 -0.2
nl-ccm NL-CCM, start OD=0.1 +0.0 +0.2 +0.1 +0.0 -0.3
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 +0.4 -0.1 -0.0 -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.3 +0.1 +0.1 +0.3 +0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.0 +0.2 -0.0 +0.3 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 +0.1 +0.1 +0.4 -0.3
nf_with_fulln NF_with_fullN +0.0 -0.1 -0.1 +0.3 +0.2
nln NLN +0.2 -0.1 +0.2 +0.3 -0.2
mgl MGL +0.1 -0.0 +0.3 +0.5 -0.3
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.2 +0.2 +0.3 +0.3 +0.1
nf_with_fulln NF_with_fullN +0.0 +0.0 +0.1 +0.4 +0.1
mgl MGL -0.0 -0.0 +0.5 +0.3 -0.0
nl-ccm NL-CCM, start OD=0.3 +0.0 +0.3 +0.2 +0.2 +0.0
nln NLN +0.1 +0.2 +0.1 +0.5 +0.1
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