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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03538 and MPMX19_03539 are separated by 104 nucleotides
MPMX19_03539 and MPMX19_03540 overlap by 4 nucleotides
MPMX19_03540 and MPMX19_03541 are separated by 4 nucleotides
MPMX19_03541 and MPMX19_03542 overlap by 8 nucleotides
MPMX19_03538: MPMX19_03538 - HTH-type transcriptional repressor NagR, at 957,032 to 957,781
_03538
MPMX19_03539: MPMX19_03539 - Acetylornithine deacetylase, at 957,886 to 959,259
_03539
MPMX19_03540: MPMX19_03540 - putative deoxycholate-binding periplasmic protein YgiS, at 959,256 to 960,827
_03540
MPMX19_03541: MPMX19_03541 - Glutathione transport system permease protein GsiC, at 960,832 to 961,779
_03541
MPMX19_03542: MPMX19_03542 - Glutathione transport system permease protein GsiD, at 961,772 to 962,602
_03542
Group
Condition
MPMX19
_03538
MPMX19
_03539
MPMX19
_03540
MPMX19
_03541
MPMX19
_03542
mgl
MGL
-0.8
-0.0
+0.1
-0.7
+0.1
mgl
MGL
-0.4
-0.0
-0.4
-0.5
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.4
+0.0
+0.1
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
+0.1
-0.1
-0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.8
+0.1
-0.1
+0.1
+0.1
mgl
MGL
-0.2
+0.4
-0.2
-0.2
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
+0.2
-0.3
+0.1
+0.1
mgl
MGL
-0.5
-0.3
+0.1
-0.0
+0.3
mgl
MGL
-0.2
-0.5
-0.0
-0.0
+0.5
nl-ccm_agar
NL-CCM_agar
-0.5
+0.3
+0.1
+0.0
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
+0.2
-0.1
+0.1
+0.1
nf_with_fulln
NF_with_fullN
+0.4
-0.1
+0.0
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.2
-0.2
+0.2
+0.3
nf
NF
-0.3
+0.3
+0.1
+0.0
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
+0.2
-0.0
+0.1
-0.2
mgl
MGL
+0.0
+0.2
-0.3
+0.4
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.5
+0.0
+0.1
-0.2
+0.1
nln
NLN
+0.3
-0.0
+0.2
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.0
+0.2
+0.4
-0.1
nl-ccm
NL-CCM, start OD=0.1
+0.3
+0.2
+0.1
-0.1
+0.1
nln
NLN
+0.5
+0.1
+0.2
-0.1
+0.0
nf_with_fulln
NF_with_fullN
+0.5
+0.1
+0.1
+0.0
-0.1
nf_with_fulln
NF_with_fullN
+0.4
+0.2
+0.0
+0.0
+0.1
nf
NF
+0.2
+0.1
+0.0
+0.1
+0.5
nf_with_fulln
NF_with_fullN
+0.9
-0.1
-0.0
+0.2
+0.0
nln
NLN
+1.2
+0.1
+0.0
-0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+1.3
+0.2
-0.2
-0.0
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+1.3
+0.0
+0.1
-0.2
+0.1
nln
NLN
+1.0
-0.0
+0.1
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.6
+0.2
+0.0
+0.3
+0.2
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