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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03533 and MPMX19_03534 are separated by 32 nucleotides
MPMX19_03534 and MPMX19_03535 overlap by 4 nucleotides
MPMX19_03535 and MPMX19_03536 overlap by 8 nucleotides
MPMX19_03536 and MPMX19_03537 overlap by 1 nucleotides
MPMX19_03533: MPMX19_03533 - hypothetical protein, at 952,366 to 953,562
_03533
MPMX19_03534: MPMX19_03534 - High-affinity branched-chain amino acid transport system permease protein LivH, at 953,595 to 954,527
_03534
MPMX19_03535: MPMX19_03535 - hypothetical protein, at 954,524 to 955,513
_03535
MPMX19_03536: MPMX19_03536 - Lipopolysaccharide export system ATP-binding protein LptB, at 955,506 to 956,261
_03536
MPMX19_03537: MPMX19_03537 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 956,261 to 956,962
_03537
Group
Condition
MPMX19
_03533
MPMX19
_03534
MPMX19
_03535
MPMX19
_03536
MPMX19
_03537
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.7
-0.5
-0.5
N.D.
mgl
MGL
+0.1
+0.0
-0.8
-0.7
N.D.
nf
NF
+0.1
-0.3
-0.2
-0.5
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.1
-0.1
-0.7
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
-0.3
+0.1
-0.5
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.1
-0.4
-0.4
N.D.
mgl
MGL
+0.1
-0.4
-0.6
+0.3
N.D.
nf_with_fulln
NF_with_fullN
+0.1
-0.1
-0.1
-0.4
N.D.
mgl
MGL
+0.1
-0.3
-0.2
-0.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.0
-0.3
-0.4
+0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-0.0
-0.4
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.1
-0.7
+0.1
N.D.
mgl
MGL
-0.2
-0.4
+0.4
-0.3
N.D.
nln
NLN
-0.1
-0.4
+0.2
-0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
-0.2
-0.4
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.2
+0.3
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
-0.3
-0.3
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.3
-0.0
-0.2
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.0
+0.2
-0.6
+0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.3
-0.2
-0.3
N.D.
nl-ccm_agar
NL-CCM_agar
+0.2
+0.0
+0.0
-0.4
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.4
+0.3
+0.1
N.D.
nf_with_fulln
NF_with_fullN
-0.2
-0.3
+0.1
+0.3
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.1
+0.2
-0.4
N.D.
nf_with_fulln
NF_with_fullN
-0.2
-0.1
-0.3
+0.6
N.D.
nln
NLN
-0.1
+0.1
-0.2
+0.4
N.D.
mgl
MGL
+0.2
-0.4
-0.1
+0.4
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.2
-0.0
+0.4
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.3
+0.0
-0.2
+0.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.2
+0.5
+0.4
N.D.
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