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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03529 and MPMX19_03530 are separated by 122 nucleotides
MPMX19_03530 and MPMX19_03531 are separated by 31 nucleotides
MPMX19_03531 and MPMX19_03532 are separated by 94 nucleotides
MPMX19_03532 and MPMX19_03533 are separated by 297 nucleotides
MPMX19_03529: MPMX19_03529 - 2,3-diketo-L-gulonate-binding periplasmic protein YiaO, at 948,717 to 949,736
_03529
MPMX19_03530: MPMX19_03530 - HTH-type transcriptional repressor NicS, at 949,859 to 950,536
_03530
MPMX19_03531: MPMX19_03531 - PCP degradation transcriptional activation protein, at 950,568 to 951,506
_03531
MPMX19_03532: MPMX19_03532 - hypothetical protein, at 951,601 to 952,068
_03532
MPMX19_03533: MPMX19_03533 - hypothetical protein, at 952,366 to 953,562
_03533
Group
Condition
MPMX19
_03529
MPMX19
_03530
MPMX19
_03531
MPMX19
_03532
MPMX19
_03533
nf_with_fulln
NF_with_fullN
-0.3
-0.2
-0.3
N.D.
-0.2
nf_with_fulln
NF_with_fullN
-0.6
-0.3
+0.1
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.7
+0.2
-0.3
N.D.
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.0
-0.6
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.6
-0.1
+0.1
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
-0.9
+0.2
-0.2
N.D.
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
+0.3
-0.6
N.D.
+0.0
nl-ccm_agar
NL-CCM_agar
-1.0
+0.0
+0.1
N.D.
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.7
+0.1
+0.1
N.D.
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.1
-0.7
N.D.
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
+0.1
+0.3
N.D.
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.6
+0.2
+0.1
N.D.
+0.0
nl-ccm_agar
NL-CCM_agar
-0.3
+0.2
-0.3
N.D.
+0.1
mgl
MGL
-0.5
+0.0
+0.4
N.D.
-0.1
mgl
MGL
-0.9
+0.3
+0.3
N.D.
+0.2
nl-ccm_agar
NL-CCM_agar
-0.4
-0.1
+0.4
N.D.
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
+0.1
+0.3
N.D.
-0.2
mgl
MGL
-0.3
+0.4
-0.1
N.D.
-0.2
nf_with_fulln
NF_with_fullN
-0.3
-0.0
+0.5
N.D.
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
+0.1
+0.1
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
+0.1
+0.1
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.1
-0.4
N.D.
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.1
-0.4
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
+0.2
+0.2
N.D.
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
+0.2
+0.1
N.D.
+0.2
mgl
MGL
-0.3
-0.1
+0.7
N.D.
+0.1
mgl
MGL
-0.2
+0.4
+0.4
N.D.
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.4
+0.7
N.D.
-0.0
mgl
MGL
+0.4
+0.6
+0.6
N.D.
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.5
+0.6
N.D.
+0.2
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