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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03522 and MPMX19_03523 are separated by 96 nucleotides
MPMX19_03523 and MPMX19_03524 are separated by 355 nucleotides
MPMX19_03524 and MPMX19_03525 are separated by 40 nucleotides
MPMX19_03525 and MPMX19_03526 overlap by 4 nucleotides
MPMX19_03522: MPMX19_03522 - Flavohemoprotein, at 940,368 to 942,467
_03522
MPMX19_03523: MPMX19_03523 - hypothetical protein, at 942,564 to 943,028
_03523
MPMX19_03524: MPMX19_03524 - hypothetical protein, at 943,384 to 945,315
_03524
MPMX19_03525: MPMX19_03525 - 3-dehydroquinate dehydratase, at 945,356 to 945,805
_03525
MPMX19_03526: MPMX19_03526 - Quinate/shikimate dehydrogenase (NAD(+)), at 945,802 to 946,704
_03526
Group
Condition
MPMX19
_03522
MPMX19
_03523
MPMX19
_03524
MPMX19
_03525
MPMX19
_03526
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-1.0
-0.6
-0.1
-1.0
mgl
MGL
-0.0
-0.0
-0.5
-0.1
-0.8
nln
NLN
+0.1
-0.5
-0.6
-0.1
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.3
-0.5
-0.2
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.6
-0.2
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.2
-0.2
+0.0
-0.6
mgl
MGL
+0.0
+0.2
-0.4
-0.6
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.3
-0.4
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.1
-0.4
-0.2
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.6
-0.4
+0.0
-0.0
nl-ccm
NL-CCM, start OD=0.3
-0.2
-0.1
-0.4
-0.2
+0.0
nln
NLN
+0.1
-0.4
-0.0
+0.0
-0.6
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
-0.0
-0.1
-0.2
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-0.2
-0.4
-0.2
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.0
+0.3
-0.3
-0.2
-0.5
nln
NLN
+0.0
-0.3
-0.4
-0.1
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.0
+0.1
-0.2
-0.2
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.1
-0.3
-0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.3
-0.2
-0.2
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.0
-0.2
+0.3
-0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.3
-0.3
-0.2
-0.1
mgl
MGL
-0.1
+0.1
+0.2
-0.4
-0.2
mgl
MGL
+0.0
+0.2
-0.8
+0.2
-0.0
nln
NLN
+0.0
+0.2
-0.2
+0.0
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.4
+0.1
+0.1
-0.4
nf_with_fulln
NF_with_fullN
+0.1
+0.0
-0.2
+0.3
-0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
+0.5
+0.1
-0.1
-0.2
nf_with_fulln
NF_with_fullN
+0.2
+0.2
-0.0
-0.1
+0.3
nf_with_fulln
NF_with_fullN
+0.1
+0.2
+0.2
+0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.9
+0.1
+0.3
-0.1
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