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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03516 and MPMX19_03517 are separated by 547 nucleotides
MPMX19_03517 and MPMX19_03518 are separated by 67 nucleotides
MPMX19_03518 and MPMX19_03519 are separated by 176 nucleotides
MPMX19_03519 and MPMX19_03520 are separated by 155 nucleotides
MPMX19_03516: MPMX19_03516 - Hydrogenase-4 component A, at 934,098 to 934,691
_03516
MPMX19_03517: MPMX19_03517 - Hydrogenase-4 component A, at 935,239 to 935,781
_03517
MPMX19_03518: MPMX19_03518 - Formate dehydrogenase H, at 935,849 to 938,020
_03518
MPMX19_03519: MPMX19_03519 - Hydrogenase maturation factor HybF, at 938,197 to 938,439
_03519
MPMX19_03520: MPMX19_03520 - Hydrogen peroxide-inducible genes activator, at 938,595 to 939,494
_03520
Group
Condition
MPMX19
_03516
MPMX19
_03517
MPMX19
_03518
MPMX19
_03519
MPMX19
_03520
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.2
N.D.
-0.5
mgl
MGL
N.D.
N.D.
-0.1
N.D.
-0.6
nf
NF
N.D.
N.D.
-0.1
N.D.
-0.5
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.1
N.D.
-0.3
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.0
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.0
N.D.
-0.4
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.3
N.D.
-0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.1
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.0
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.1
N.D.
-0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.1
N.D.
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
+0.0
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.1
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.0
N.D.
-0.3
mgl
MGL
N.D.
N.D.
+0.1
N.D.
-0.2
nln
NLN
N.D.
N.D.
-0.1
N.D.
+0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.2
N.D.
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
-0.0
N.D.
+0.2
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
+0.1
N.D.
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
-0.0
N.D.
+0.3
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
+0.1
N.D.
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
+0.0
N.D.
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
+0.1
N.D.
+0.2
nln
NLN
N.D.
N.D.
+0.1
N.D.
+0.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
+0.0
N.D.
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
+0.0
N.D.
+0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
+0.1
N.D.
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
-0.0
N.D.
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
+0.1
N.D.
+0.4
mgl
MGL
N.D.
N.D.
+0.2
N.D.
+0.6
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