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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03505 and MPMX19_03506 are separated by 43 nucleotides
MPMX19_03506 and MPMX19_03507 overlap by 4 nucleotides
MPMX19_03507 and MPMX19_03508 overlap by 4 nucleotides
MPMX19_03508 and MPMX19_03509 overlap by 4 nucleotides
MPMX19_03505: MPMX19_03505 - putative formate transporter 1, at 922,355 to 923,263
_03505
MPMX19_03506: MPMX19_03506 - Hydrogenase 3 maturation protease, at 923,307 to 923,765
_03506
MPMX19_03507: MPMX19_03507 - hypothetical protein, at 923,762 to 924,229
_03507
MPMX19_03508: MPMX19_03508 - Formate hydrogenlyase subunit 7, at 924,226 to 925,029
_03508
MPMX19_03509: MPMX19_03509 - NAD(P)H-quinone oxidoreductase subunit I, chloroplastic, at 925,026 to 925,601
_03509
Group
Condition
MPMX19
_03505
MPMX19
_03506
MPMX19
_03507
MPMX19
_03508
MPMX19
_03509
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
N.D.
-0.7
-0.3
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
N.D.
-0.6
-0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.3
N.D.
+0.2
-0.5
-0.4
nl-ccm
NL-CCM, start OD=0.3
-0.1
N.D.
+0.1
-0.1
-0.7
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
-0.2
-0.2
-0.3
mgl
MGL
-0.1
N.D.
-0.0
-0.1
-0.6
nl-ccm
NL-CCM, start OD=0.3
+0.1
N.D.
-0.2
-0.4
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
N.D.
-0.2
-0.1
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
N.D.
-0.1
-0.3
-0.2
mgl
MGL
+0.0
N.D.
-0.4
+0.2
-0.3
nf
NF
-0.3
N.D.
-0.2
-0.2
+0.1
nf
NF
-0.2
N.D.
-0.4
-0.0
+0.1
nl-ccm_agar
NL-CCM_agar
-0.0
N.D.
+0.2
-0.1
-0.4
mgl
MGL
+0.3
N.D.
-0.5
-0.6
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
N.D.
-0.3
-0.5
+0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
N.D.
-0.1
-0.2
+0.4
nln
NLN
-0.1
N.D.
-0.3
-0.1
+0.4
nf_with_fulln
NF_with_fullN
-0.3
N.D.
-0.3
-0.2
+0.7
nl-ccm
NL-CCM, start OD=0.1
+0.1
N.D.
-0.2
-0.3
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
N.D.
+0.4
-0.2
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
N.D.
-0.1
-0.0
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
N.D.
-0.2
-0.1
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
N.D.
-0.0
-0.2
+0.4
nln
NLN
-0.1
N.D.
+0.1
-0.3
+0.4
mgl
MGL
-0.2
N.D.
+0.2
-0.2
+0.4
nln
NLN
-0.2
N.D.
+0.1
+0.1
+0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
N.D.
-0.1
-0.0
+0.6
nf_with_fulln
NF_with_fullN
-0.2
N.D.
+0.3
-0.2
+0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
N.D.
+0.2
-0.1
+0.5
nf_with_fulln
NF_with_fullN
-0.1
N.D.
+0.3
+0.1
+0.6
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