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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03495 and MPMX19_03496 are separated by 9 nucleotides
MPMX19_03496 and MPMX19_03497 are separated by 252 nucleotides
MPMX19_03497 and MPMX19_03498 are separated by 4 nucleotides
MPMX19_03498 and MPMX19_03499 overlap by 4 nucleotides
MPMX19_03495: MPMX19_03495 - Adaptive-response sensory-kinase SasA, at 910,849 to 912,963
_03495
MPMX19_03496: MPMX19_03496 - Protein FdhE, at 912,973 to 913,887
_03496
MPMX19_03497: MPMX19_03497 - Formate dehydrogenase-O major subunit, at 914,140 to 917,202
_03497
MPMX19_03498: MPMX19_03498 - Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit, at 917,207 to 918,118
_03498
MPMX19_03499: MPMX19_03499 - Formate dehydrogenase, cytochrome b556(fdo) subunit, at 918,115 to 918,774
_03499
Group
Condition
MPMX19
_03495
MPMX19
_03496
MPMX19
_03497
MPMX19
_03498
MPMX19
_03499
nl-ccm
NL-CCM, start OD=0.3
-0.2
-0.5
-0.1
+0.1
-1.6
mgl
MGL
+0.1
-0.3
+0.1
+0.0
-1.4
mgl
MGL
+0.1
-1.0
+0.1
+0.1
-0.8
nf
NF
-0.2
-0.0
-0.1
-0.0
-1.1
nln
NLN
+0.0
+0.1
-0.1
-0.1
-1.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.1
-0.0
-0.0
-1.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.8
-0.1
+0.0
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.1
+0.1
-0.2
-0.8
nl-ccm_agar
NL-CCM_agar
+0.1
-0.5
-0.2
-0.1
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.9
-0.0
+0.0
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.1
-0.0
-0.0
-0.7
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.1
-0.1
+0.0
-0.8
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.5
-0.2
+0.2
-0.6
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.3
-0.0
+0.0
-0.7
nln
NLN
+0.0
+0.4
-0.1
-0.1
-1.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.5
-0.1
+0.1
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.4
+0.0
-0.1
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.4
-0.0
-0.2
-0.6
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.3
-0.0
+0.1
-0.6
nf_with_fulln
NF_with_fullN
+0.1
+0.3
-0.2
-0.2
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.2
-0.0
-0.0
-0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.0
+0.1
-0.1
-0.6
nf_with_fulln
NF_with_fullN
+0.2
+0.4
+0.1
+0.0
-1.0
mgl
MGL
+0.2
-1.2
+0.2
-0.2
+0.8
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.5
+0.0
+0.1
-0.6
mgl
MGL
+0.2
-0.1
-0.2
-0.2
+0.3
nl-ccm
NL-CCM, start OD=0.1
+0.0
-0.5
+0.0
+0.1
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
+0.6
-0.1
-0.0
-0.4
nln
NLN
-0.1
+0.6
-0.0
+0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.9
+0.1
-0.0
-0.2
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