Fitness for 5 genes in Azospirillum sp. SherDot2

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Top 30 experiments (either direction), sorted by average fitness

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500 ntMPMX19_03460 and MPMX19_03461 overlap by 4 nucleotidesMPMX19_03461 and MPMX19_03462 are separated by 392 nucleotidesMPMX19_03462 and MPMX19_03463 overlap by 8 nucleotidesMPMX19_03463 and MPMX19_03464 are separated by 106 nucleotides MPMX19_03460: MPMX19_03460 - Signal transduction histidine-protein kinase AtoS, at 868,639 to 870,501 _03460 MPMX19_03461: MPMX19_03461 - Regulatory protein AtoC, at 870,498 to 871,919 _03461 MPMX19_03462: MPMX19_03462 - Acetate CoA-transferase subunit alpha, at 872,312 to 872,974 _03462 MPMX19_03463: MPMX19_03463 - Butyrate--acetoacetate CoA-transferase subunit B, at 872,967 to 873,623 _03463 MPMX19_03464: MPMX19_03464 - Putative short-chain fatty acid transporter, at 873,730 to 875,103 _03464
Group Condition MPMX19_03460 MPMX19_03461 MPMX19_03462 MPMX19_03463 MPMX19_03464
nf_with_fulln NF_with_fullN +0.0 +0.0 -0.5 N.D. -0.4
nf_with10percent_fulln NF_with10percent_fullN -0.1 -0.4 -0.2 N.D. -0.1
nl-ccm; low oxygen NL-CCM; low oxygen -0.2 -0.1 -0.3 N.D. -0.2
nf_with_fulln NF_with_fullN -0.1 -0.1 -0.3 N.D. -0.3
nf_with10percent_fulln NF_with10percent_fullN +0.0 -0.3 -0.3 N.D. -0.2
nl-ccm_agar NL-CCM_agar -0.1 +0.1 -0.3 N.D. -0.3
nf_with_fulln NF_with_fullN +0.2 +0.0 -0.7 N.D. -0.1
mgl MGL -0.1 -0.0 -0.6 N.D. +0.2
nf_with_fulln NF_with_fullN +0.1 -0.2 -0.3 N.D. -0.1
nf_with10percent_fulln NF_with10percent_fullN +0.2 +0.0 -0.7 N.D. +0.0
nf_with_fulln NF_with_fullN +0.2 -0.1 -0.5 N.D. +0.1
nf_with10percent_fulln NF_with10percent_fullN +0.3 -0.5 +0.1 N.D. -0.3
nf_with10percent_fulln NF_with10percent_fullN -0.1 -0.3 +0.1 N.D. +0.4
nl-ccm NL-CCM, start OD=0.3 +0.0 -0.2 +0.3 N.D. -0.1
nl-ccm NL-CCM, start OD=0.1 +0.1 -0.1 +0.3 N.D. -0.2
mgl MGL -0.1 +0.3 -0.3 N.D. +0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.2 +0.3 N.D. +0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.1 -0.1 +0.4 N.D. -0.1
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.1 +0.5 N.D. -0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.1 -0.2 +0.5 N.D. -0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 -0.1 +0.6 N.D. -0.0
nln NLN +0.1 +0.0 +0.5 N.D. -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 -0.1 +0.4 N.D. +0.1
nl-ccm; spin-x control NL-CCM; spin-x control +0.0 +0.0 +0.6 N.D. -0.1
nl-ccm_agar NL-CCM_agar +0.2 -0.0 +0.6 N.D. -0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.6 +0.1 -0.0 N.D. -0.1
nl-ccm; spin-x control NL-CCM; spin-x control +0.1 -0.1 +0.4 N.D. +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 -0.1 +0.6 N.D. +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 -0.0 +0.4 N.D. +0.2
mgl MGL +0.3 +0.3 +0.8 N.D. +0.1
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