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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03426 and MPMX19_03427 are separated by 159 nucleotides
MPMX19_03427 and MPMX19_03428 are separated by 3 nucleotides
MPMX19_03428 and MPMX19_03429 overlap by 4 nucleotides
MPMX19_03429 and MPMX19_03430 overlap by 4 nucleotides
MPMX19_03426: MPMX19_03426 - Trans-aconitate 2-methyltransferase, at 816,992 to 818,419
_03426
MPMX19_03427: MPMX19_03427 - hypothetical protein, at 818,579 to 819,355
_03427
MPMX19_03428: MPMX19_03428 - hypothetical protein, at 819,359 to 821,287
_03428
MPMX19_03429: MPMX19_03429 - hypothetical protein, at 821,284 to 823,326
_03429
MPMX19_03430: MPMX19_03430 - hypothetical protein, at 823,323 to 823,922
_03430
Group
Condition
MPMX19
_03426
MPMX19
_03427
MPMX19
_03428
MPMX19
_03429
MPMX19
_03430
mgl
MGL
+0.1
-0.9
-0.0
-0.2
-0.5
nl-ccm_agar
NL-CCM_agar
+0.1
-1.0
-0.2
+0.1
+0.0
nf_with_fulln
NF_with_fullN
-0.3
-0.9
+0.1
+0.3
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.7
-0.3
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.3
-0.3
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-0.4
-0.2
+0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.5
-0.2
-0.0
+0.1
mgl
MGL
-0.2
-0.6
-0.2
+0.1
+0.5
mgl
MGL
-0.0
-0.7
+0.1
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.5
+0.0
-0.2
+0.2
mgl
MGL
+0.2
-0.0
-0.5
+0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.3
-0.5
+0.0
+0.2
nf_with_fulln
NF_with_fullN
-0.1
-0.2
-0.3
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.2
+0.1
-0.3
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.3
+0.2
-0.2
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.4
-0.0
+0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.4
-0.1
+0.1
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.6
+0.1
+0.2
+0.1
mgl
MGL
-0.0
+0.2
-0.0
-0.4
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.5
+0.1
+0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-0.4
+0.1
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.4
-0.3
-0.2
+0.1
nf
NF
+0.2
-0.1
-0.3
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
-0.2
-0.0
+0.3
+0.3
nf_with_fulln
NF_with_fullN
+0.2
-0.6
+0.1
+0.2
+0.4
nf_with_fulln
NF_with_fullN
+0.1
-0.0
-0.2
+0.3
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.5
-0.2
-0.0
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.3
-0.0
+0.3
+0.1
nf_with_fulln
NF_with_fullN
+0.2
+0.1
-0.0
+0.3
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+1.0
-0.4
+0.2
+0.6
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