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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03415 and MPMX19_03416 are separated by 10 nucleotides
MPMX19_03416 and MPMX19_03417 are separated by 52 nucleotides
MPMX19_03417 and MPMX19_03418 overlap by 4 nucleotides
MPMX19_03418 and MPMX19_03419 overlap by 37 nucleotides
MPMX19_03415: MPMX19_03415 - hypothetical protein, at 804,216 to 804,908
_03415
MPMX19_03416: MPMX19_03416 - Actin cross-linking toxin VgrG1, at 804,919 to 807,036
_03416
MPMX19_03417: MPMX19_03417 - Protein ClpV1, at 807,089 to 809,740
_03417
MPMX19_03418: MPMX19_03418 - hypothetical protein, at 809,737 to 810,774
_03418
MPMX19_03419: MPMX19_03419 - hypothetical protein, at 810,738 to 812,534
_03419
Group
Condition
MPMX19
_03415
MPMX19
_03416
MPMX19
_03417
MPMX19
_03418
MPMX19
_03419
nf_with_fulln
NF_with_fullN
-0.1
-0.3
+0.0
+0.1
-0.4
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.2
-0.1
-0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.2
-0.2
-0.0
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.3
-0.2
-0.1
-0.3
nl-ccm_agar
NL-CCM_agar
-0.1
-0.1
-0.3
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.1
-0.1
-0.2
-0.3
nl-ccm
NL-CCM, start OD=0.3
-0.2
-0.3
-0.1
+0.2
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
-0.0
-0.1
-0.2
+0.2
mgl
MGL
-0.5
+0.0
-0.2
+0.5
-0.2
nl-ccm_agar
NL-CCM_agar
-0.1
-0.0
-0.2
-0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.0
-0.4
-0.1
+0.5
-0.3
mgl
MGL
+0.0
-0.2
+0.1
-0.3
+0.1
nl-ccm_agar
NL-CCM_agar
-0.2
+0.1
+0.1
-0.3
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.0
-0.1
+0.1
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.0
+0.1
-0.3
+0.1
mgl
MGL
-0.1
-0.1
-0.1
-0.2
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
-0.2
+0.1
-0.0
+0.3
mgl
MGL
-0.1
+0.3
-0.2
-0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
-0.0
-0.1
+0.0
+0.3
nln
NLN
-0.1
-0.1
+0.1
+0.3
-0.1
nf_with_fulln
NF_with_fullN
+0.1
-0.2
-0.0
+0.4
-0.1
nln
NLN
-0.1
-0.3
+0.1
+0.5
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.0
+0.2
-0.2
+0.1
nf_with_fulln
NF_with_fullN
-0.1
-0.1
+0.1
+0.5
-0.1
nf_with_fulln
NF_with_fullN
-0.0
-0.2
+0.2
+0.5
-0.2
mgl
MGL
-0.0
-0.1
-0.1
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.1
+0.0
+0.2
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.1
+0.2
-0.1
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.2
-0.1
+0.0
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.0
+0.0
+0.1
+0.3
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