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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03404 and MPMX19_03405 are separated by 291 nucleotides
MPMX19_03405 and MPMX19_03406 are separated by 173 nucleotides
MPMX19_03406 and MPMX19_03407 are separated by 549 nucleotides
MPMX19_03407 and MPMX19_03408 are separated by 113 nucleotides
MPMX19_03404: MPMX19_03404 - Glutathione-binding protein GsiB, at 791,097 to 792,599
_03404
MPMX19_03405: MPMX19_03405 - hypothetical protein, at 792,891 to 794,300
_03405
MPMX19_03406: MPMX19_03406 - HTH-type transcriptional regulator HdfR, at 794,474 to 795,430
_03406
MPMX19_03407: MPMX19_03407 - 16S ribosomal RNA, at 795,980 to 797,461
_03407
MPMX19_03408: MPMX19_03408 - tRNA-Ile, at 797,575 to 797,651
_03408
Group
Condition
MPMX19
_03404
MPMX19
_03405
MPMX19
_03406
MPMX19
_03407
MPMX19
_03408
nf_with_fulln
NF_with_fullN
+0.0
-0.1
-0.9
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+0.0
-0.2
-0.7
N.D.
N.D.
nf
NF
-0.0
-0.2
-0.6
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
-0.3
-0.4
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.3
-0.3
N.D.
N.D.
nln
NLN
-0.1
-0.1
-0.4
N.D.
N.D.
nln
NLN
-0.0
-0.0
-0.5
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+0.0
-0.1
-0.5
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
+0.0
-0.1
-0.5
N.D.
N.D.
nln
NLN
-0.0
-0.1
-0.4
N.D.
N.D.
nln
NLN
-0.2
-0.1
-0.2
N.D.
N.D.
nln
NLN
-0.2
+0.0
-0.3
N.D.
N.D.
nln
NLN
+0.1
-0.2
-0.2
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.1
-0.3
N.D.
N.D.
mgl
MGL
+0.2
-0.0
-0.4
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.0
-0.4
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.1
+0.1
N.D.
N.D.
mgl
MGL
+0.2
-0.1
-0.2
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-0.2
-0.2
N.D.
N.D.
mgl
MGL
-0.1
-0.3
+0.2
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.1
-0.2
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.3
+0.6
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.1
-0.2
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.1
+0.3
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.2
+0.3
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.1
+0.4
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.0
+0.5
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-0.0
+0.2
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.1
+0.4
N.D.
N.D.
mgl
MGL
+0.1
+0.0
+0.6
N.D.
N.D.
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