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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03384 and MPMX19_03385 are separated by 273 nucleotides
MPMX19_03385 and MPMX19_03386 are separated by 142 nucleotides
MPMX19_03386 and MPMX19_03387 are separated by 124 nucleotides
MPMX19_03387 and MPMX19_03388 overlap by 4 nucleotides
MPMX19_03384: MPMX19_03384 - 5-oxoprolinase subunit A, at 768,222 to 769,007
_03384
MPMX19_03385: MPMX19_03385 - HTH-type transcriptional regulator HdfR, at 769,281 to 770,192
_03385
MPMX19_03386: MPMX19_03386 - HTH-type transcriptional activator RhaR, at 770,335 to 771,210
_03386
MPMX19_03387: MPMX19_03387 - hypothetical protein, at 771,335 to 774,394
_03387
MPMX19_03388: MPMX19_03388 - 6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha, at 774,391 to 775,227
_03388
Group
Condition
MPMX19
_03384
MPMX19
_03385
MPMX19
_03386
MPMX19
_03387
MPMX19
_03388
nf_with_fulln
NF_with_fullN
-0.6
-0.2
-0.3
-0.1
N.D.
nf_with_fulln
NF_with_fullN
-0.4
-0.1
-0.1
-0.2
N.D.
nf_with_fulln
NF_with_fullN
-0.3
+0.0
-0.2
-0.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.3
-0.3
-0.3
N.D.
nf_with_fulln
NF_with_fullN
-0.3
+0.0
-0.2
+0.0
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
+0.2
-0.1
-0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.1
-0.0
-0.3
N.D.
nf_with_fulln
NF_with_fullN
-0.2
-0.1
-0.3
+0.2
N.D.
nf_with_fulln
NF_with_fullN
-0.3
-0.1
+0.0
+0.1
N.D.
nln
NLN
-0.4
+0.1
+0.1
+0.0
N.D.
mgl
MGL
-0.2
-0.1
+0.2
-0.1
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.3
+0.3
-0.1
-0.1
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.1
+0.1
-0.1
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
-0.1
+0.3
-0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
+0.0
+0.3
-0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
+0.1
+0.2
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
+0.0
+0.2
+0.1
N.D.
nln
NLN
-0.2
+0.2
-0.1
+0.1
N.D.
nl-ccm_agar
NL-CCM_agar
-0.2
+0.3
+0.0
-0.0
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.1
+0.2
+0.1
N.D.
mgl
MGL
-0.2
+0.3
+0.3
-0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.3
-0.1
+0.2
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
+0.2
+0.1
+0.2
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
+0.1
+0.2
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.4
+0.1
-0.1
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
+0.2
+0.2
+0.0
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.3
+0.0
+0.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
+0.1
+0.2
+0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.2
+0.3
-0.0
N.D.
mgl
MGL
-0.1
+0.2
+0.5
+0.1
N.D.
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