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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03371 and MPMX19_03372 are separated by 14 nucleotides
MPMX19_03372 and MPMX19_03373 are separated by 46 nucleotides
MPMX19_03373 and MPMX19_03374 overlap by 4 nucleotides
MPMX19_03374 and MPMX19_03375 overlap by 4 nucleotides
MPMX19_03371: MPMX19_03371 - hypothetical protein, at 746,523 to 746,906
_03371
MPMX19_03372: MPMX19_03372 - hypothetical protein, at 746,921 to 750,010
_03372
MPMX19_03373: MPMX19_03373 - Type I secretion system membrane fusion protein PrsE, at 750,057 to 751,460
_03373
MPMX19_03374: MPMX19_03374 - Alpha-hemolysin translocation ATP-binding protein HlyB, at 751,457 to 753,139
_03374
MPMX19_03375: MPMX19_03375 - Outer membrane protein TolC, at 753,136 to 754,560
_03375
Group
Condition
MPMX19
_03371
MPMX19
_03372
MPMX19
_03373
MPMX19
_03374
MPMX19
_03375
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
+0.1
+0.1
-1.0
+0.3
nf_with_fulln
NF_with_fullN
-0.4
+0.1
-0.4
-0.0
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.1
-0.2
-1.1
-0.1
mgl
MGL
-1.3
+0.1
-0.3
+0.3
+0.4
nf_with_fulln
NF_with_fullN
-0.1
-0.0
+0.0
-0.1
-0.6
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
+0.1
-0.1
+0.2
-0.3
nf
NF
-0.5
+0.0
-0.2
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.1
-0.2
+0.2
-0.2
mgl
MGL
-0.6
+0.2
-0.1
-0.4
+0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.1
-0.1
-0.4
+0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.0
+0.2
-0.5
+0.1
mgl
MGL
-0.6
+0.1
+0.1
-0.6
+0.9
nf
NF
-0.4
+0.1
-0.1
-0.0
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.0
+0.0
-0.5
+0.4
mgl
MGL
+0.1
-0.1
+0.2
+0.3
-0.3
nl-ccm
NL-CCM, start OD=0.3
-0.2
-0.1
-0.1
+0.0
+0.5
nl-ccm
NL-CCM, start OD=0.3
+0.2
+0.1
-0.3
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
+0.1
-0.2
+0.4
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.0
-0.2
+0.2
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.1
-0.1
-0.1
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
+0.1
+0.1
+0.3
+0.2
mgl
MGL
+0.0
+0.1
+0.2
-0.1
+0.5
nln
NLN
+0.2
+0.0
-0.1
+0.4
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
+0.2
-0.1
+0.1
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.0
+0.2
+0.1
+0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.0
-0.1
+0.2
+0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.0
+0.1
+0.3
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.1
+0.2
+0.4
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
-0.0
+0.1
+0.3
+0.4
mgl
MGL
+0.6
+0.1
-0.1
+0.3
+0.6
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