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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03358 and MPMX19_03359 are separated by 33 nucleotides
MPMX19_03359 and MPMX19_03360 overlap by 4 nucleotides
MPMX19_03360 and MPMX19_03361 are separated by 31 nucleotides
MPMX19_03361 and MPMX19_03362 are separated by 56 nucleotides
MPMX19_03358: MPMX19_03358 - hypothetical protein, at 731,737 to 732,921
_03358
MPMX19_03359: MPMX19_03359 - hypothetical protein, at 732,955 to 733,701
_03359
MPMX19_03360: MPMX19_03360 - hypothetical protein, at 733,698 to 734,111
_03360
MPMX19_03361: MPMX19_03361 - hypothetical protein, at 734,143 to 735,297
_03361
MPMX19_03362: MPMX19_03362 - ABC transporter ATP-binding/permease protein YojI, at 735,354 to 737,027
_03362
Group
Condition
MPMX19
_03358
MPMX19
_03359
MPMX19
_03360
MPMX19
_03361
MPMX19
_03362
mgl
MGL
-0.0
-0.1
-0.4
-0.7
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.0
-1.0
+0.1
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.0
-0.5
-0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.1
-0.3
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.0
-0.3
-0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.0
-0.1
-0.5
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.0
-0.3
-0.1
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.0
+0.1
+0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.0
+0.2
-0.4
-0.1
+0.1
mgl
MGL
+0.1
+0.3
-0.4
-0.1
-0.1
nln
NLN
-0.2
+0.2
-0.2
-0.1
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
+0.0
-0.1
-0.3
+0.1
mgl
MGL
-0.2
+0.2
-0.3
+0.1
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.1
+0.1
-0.3
+0.1
mgl
MGL
-0.3
-0.1
+0.0
+0.2
+0.1
nln
NLN
-0.1
+0.0
-0.3
+0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
-0.2
-0.0
+0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
+0.2
+0.2
-0.2
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.2
+0.2
-0.3
+0.1
nf_with_fulln
NF_with_fullN
+0.2
+0.4
-0.2
-0.1
-0.0
nln
NLN
+0.0
+0.2
-0.2
+0.3
-0.1
nl-ccm
NL-CCM, start OD=0.1
+0.0
-0.1
+0.3
+0.1
-0.2
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.1
+0.3
-0.1
+0.1
nf
NF
+0.1
-0.2
+0.4
-0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.1
-0.2
+0.3
+0.0
nf_with_fulln
NF_with_fullN
-0.1
+0.3
+0.2
-0.1
+0.1
mgl
MGL
+0.1
+0.1
+0.1
-0.1
+0.3
nln
NLN
+0.2
+0.1
-0.1
+0.4
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.2
-0.2
+0.2
+0.1
nf_with_fulln
NF_with_fullN
+0.2
+0.2
+0.1
+0.6
-0.0
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