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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03308 and MPMX19_03309 are separated by 4 nucleotides
MPMX19_03309 and MPMX19_03310 are separated by 121 nucleotides
MPMX19_03310 and MPMX19_03311 are separated by 47 nucleotides
MPMX19_03311 and MPMX19_03312 overlap by 4 nucleotides
MPMX19_03308: MPMX19_03308 - hypothetical protein, at 655,229 to 656,044
_03308
MPMX19_03309: MPMX19_03309 - Pyridoxal 4-dehydrogenase, at 656,049 to 657,074
_03309
MPMX19_03310: MPMX19_03310 - Ribose import binding protein RbsB, at 657,196 to 658,140
_03310
MPMX19_03311: MPMX19_03311 - Ribose import permease protein RbsC, at 658,188 to 659,279
_03311
MPMX19_03312: MPMX19_03312 - Galactose/methyl galactoside import ATP-binding protein MglA, at 659,276 to 660,850
_03312
Group
Condition
MPMX19
_03308
MPMX19
_03309
MPMX19
_03310
MPMX19
_03311
MPMX19
_03312
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.8
-0.1
-0.1
-0.3
mgl
MGL
-0.5
-0.5
-0.0
+0.1
+0.2
nf_with_fulln
NF_with_fullN
-0.2
+0.0
-0.2
+0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.4
-0.0
+0.1
-0.1
+0.0
nl-ccm
NL-CCM, start OD=0.3
-0.5
+0.0
+0.2
+0.0
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.3
+0.2
-0.7
-0.3
mgl
MGL
-0.4
+0.1
-0.2
+0.1
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
-0.1
+0.0
-0.3
+0.2
nln
NLN
+0.3
-0.0
-0.2
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.4
-0.1
+0.1
-0.1
-0.1
nf_with_fulln
NF_with_fullN
+0.4
+0.0
+0.2
-0.3
-0.2
mgl
MGL
-0.2
+0.3
+0.1
+0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.1
+0.4
+0.3
+0.3
mgl
MGL
-0.3
+0.1
+0.2
+0.0
+0.4
nl-ccm_agar
NL-CCM_agar
+0.3
+0.0
-0.1
+0.0
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.4
-0.1
+0.1
+0.1
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.6
-0.1
-0.0
+0.1
-0.0
nln
NLN
+0.5
+0.1
+0.0
+0.0
-0.0
nln
NLN
+0.5
+0.0
-0.0
-0.1
+0.2
mgl
MGL
+0.6
-0.1
+0.0
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.6
+0.0
-0.0
+0.0
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
+0.1
+0.1
+0.1
+0.1
nln
NLN
+0.5
+0.1
+0.0
+0.1
-0.1
nln
NLN
+0.6
-0.0
+0.1
+0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.2
+0.2
+0.3
+0.3
nl-ccm_agar
NL-CCM_agar
+0.5
+0.2
-0.1
+0.1
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.6
+0.2
-0.0
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.4
+0.3
+0.0
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.5
+0.2
+0.1
+0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.8
+0.1
+0.0
+0.1
+0.2
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