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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03302 and MPMX19_03303 are separated by 25 nucleotides
MPMX19_03303 and MPMX19_03304 overlap by 1 nucleotides
MPMX19_03304 and MPMX19_03305 are separated by 19 nucleotides
MPMX19_03305 and MPMX19_03306 are separated by 31 nucleotides
MPMX19_03302: MPMX19_03302 - Trehalose transport system permease protein SugB, at 648,981 to 649,811
_03302
MPMX19_03303: MPMX19_03303 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 649,837 to 650,919
_03303
MPMX19_03304: MPMX19_03304 - Pyridoxal 4-dehydrogenase, at 650,919 to 651,947
_03304
MPMX19_03305: MPMX19_03305 - L-fucose mutarotase, at 651,967 to 652,422
_03305
MPMX19_03306: MPMX19_03306 - hypothetical protein, at 652,454 to 653,635
_03306
Group
Condition
MPMX19
_03302
MPMX19
_03303
MPMX19
_03304
MPMX19
_03305
MPMX19
_03306
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.5
-0.4
-0.4
-1.1
mgl
MGL
+0.2
-0.5
-0.4
+0.1
-0.8
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.3
+0.1
-0.4
-1.0
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.6
+0.1
+0.0
-0.8
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.3
-0.5
-0.2
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.9
+0.1
+0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.2
-0.9
+0.4
-0.3
nl-ccm_agar
NL-CCM_agar
-0.2
-0.3
-0.2
+0.4
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.2
-0.2
+0.1
-0.6
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.1
+0.2
+0.2
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
+0.2
+0.2
-0.6
mgl
MGL
+0.2
-0.3
-0.4
+0.2
+0.2
nln
NLN
+0.3
+0.2
+0.1
-0.3
-0.3
nl-ccm
NL-CCM, start OD=0.1
+0.2
-0.5
-0.2
+0.4
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.1
-0.3
+0.6
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.4
+0.0
+0.3
-0.1
-0.4
nf
NF
-0.0
-0.4
+0.2
+0.5
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.2
+0.5
-0.4
+0.4
nf_with_fulln
NF_with_fullN
-0.1
+0.4
+0.0
-0.4
+0.5
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.2
+0.2
+0.3
-0.5
nln
NLN
-0.3
+0.3
+0.2
+0.1
+0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
-0.1
+0.2
+0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.1
+0.5
-0.6
+0.8
mgl
MGL
+0.0
+0.2
+0.4
-0.1
+0.6
nf_with_fulln
NF_with_fullN
-0.1
+0.0
-0.0
+0.6
+0.6
nln
NLN
+0.1
+0.2
+0.0
+0.4
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.3
+0.3
+0.4
+0.4
nf_with_fulln
NF_with_fullN
+0.3
-0.0
+0.1
+0.5
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.2
+0.0
+0.3
+0.5
nf_with_fulln
NF_with_fullN
+0.4
+0.2
+0.3
+0.1
+0.3
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