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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03298 and MPMX19_03299 are separated by 29 nucleotides
MPMX19_03299 and MPMX19_03300 are separated by 227 nucleotides
MPMX19_03300 and MPMX19_03301 overlap by 4 nucleotides
MPMX19_03301 and MPMX19_03302 overlap by 4 nucleotides
MPMX19_03298: MPMX19_03298 - hypothetical protein, at 644,815 to 645,546
_03298
MPMX19_03299: MPMX19_03299 - 4-hydroxy-tetrahydrodipicolinate synthase, at 645,576 to 646,475
_03299
MPMX19_03300: MPMX19_03300 - Erythritol/L-threitol-binding protein, at 646,703 to 648,055
_03300
MPMX19_03301: MPMX19_03301 - Melibiose/raffinose/stachyose import permease protein MelD, at 648,052 to 648,984
_03301
MPMX19_03302: MPMX19_03302 - Trehalose transport system permease protein SugB, at 648,981 to 649,811
_03302
Group
Condition
MPMX19
_03298
MPMX19
_03299
MPMX19
_03300
MPMX19
_03301
MPMX19
_03302
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.1
+0.1
-0.1
-0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.6
+0.2
+0.2
-0.0
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.9
-0.3
-0.2
-0.1
+0.3
mgl
MGL
-0.7
-0.4
-0.1
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.1
-0.2
+0.1
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-1.1
+0.1
-0.0
-0.3
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-1.3
+0.3
-0.2
+0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.7
-0.0
-0.3
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
-0.2
-0.2
-0.1
+0.1
nln
NLN
-0.9
+0.0
+0.1
+0.1
+0.0
mgl
MGL
-0.5
-0.3
+0.1
+0.1
+0.1
nf_with_fulln
NF_with_fullN
-0.5
-0.1
+0.3
-0.0
-0.1
nl-ccm
NL-CCM, start OD=0.1
-0.8
+0.1
+0.1
+0.1
+0.2
nln
NLN
-0.5
+0.0
-0.1
-0.0
+0.3
nln
NLN
-0.6
+0.3
+0.1
-0.1
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
-0.0
+0.3
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.6
+0.2
+0.0
+0.2
+0.0
mgl
MGL
+0.4
-0.4
-0.1
+0.2
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.4
+0.1
-0.0
+0.3
mgl
MGL
+0.1
+0.1
-0.5
+0.1
+0.2
mgl
MGL
-0.6
+0.4
+0.2
+0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
+0.5
-0.9
-0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.7
-0.2
-0.1
-0.1
-0.1
mgl
MGL
-0.5
+0.1
+0.3
+0.2
+0.2
nln
NLN
+0.6
+0.0
+0.2
-0.1
-0.4
nf_with_fulln
NF_with_fullN
+0.5
-0.4
-0.0
-0.1
+0.4
nln
NLN
+0.4
+0.4
-0.1
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.5
+0.1
-0.1
+0.1
+0.3
nf_with_fulln
NF_with_fullN
+0.7
+0.3
+0.2
-0.1
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
+0.2
+0.1
+0.0
+0.4
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