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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03295 and MPMX19_03296 are separated by 142 nucleotides
MPMX19_03296 and MPMX19_03297 overlap by 4 nucleotides
MPMX19_03297 and MPMX19_03298 are separated by 11 nucleotides
MPMX19_03298 and MPMX19_03299 are separated by 29 nucleotides
MPMX19_03295: MPMX19_03295 - HTH-type transcriptional regulator McbR, at 642,299 to 643,006
_03295
MPMX19_03296: MPMX19_03296 - L-carnitine dehydrogenase, at 643,149 to 644,093
_03296
MPMX19_03297: MPMX19_03297 - hypothetical protein, at 644,090 to 644,803
_03297
MPMX19_03298: MPMX19_03298 - hypothetical protein, at 644,815 to 645,546
_03298
MPMX19_03299: MPMX19_03299 - 4-hydroxy-tetrahydrodipicolinate synthase, at 645,576 to 646,475
_03299
Group
Condition
MPMX19
_03295
MPMX19
_03296
MPMX19
_03297
MPMX19
_03298
MPMX19
_03299
mgl
MGL
-1.3
-0.8
-1.1
+0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-1.5
-0.1
-0.7
-0.5
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.6
-0.4
-0.4
-0.7
-0.0
mgl
MGL
-1.7
+0.4
-0.0
-0.5
-0.3
nln
NLN
-1.2
+0.2
+0.1
-0.9
+0.0
mgl
MGL
-0.2
-0.4
+0.1
-0.7
-0.4
mgl
MGL
-0.3
-0.7
-0.1
-0.5
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.3
-0.3
-1.6
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.3
+0.1
-1.1
-0.2
mgl
MGL
-1.5
+0.0
+0.2
-0.6
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
+0.0
-0.0
-1.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.0
-0.0
-0.0
-0.6
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.2
-0.1
-0.9
-0.3
nf
NF
-1.3
+0.1
-0.3
-0.2
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.1
+0.3
-1.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.4
+0.5
-0.7
-0.2
+0.1
nf_with_fulln
NF_with_fullN
-0.8
+0.2
-0.2
+0.5
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.0
-0.0
+0.5
-0.2
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.0
-0.5
-0.8
+0.4
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.1
+0.6
-1.3
+0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
+0.2
-0.8
+0.4
+0.1
mgl
MGL
-1.2
+0.4
+0.4
+0.4
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
-0.4
+0.1
+0.7
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.5
-1.1
+0.7
+0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
+0.3
+0.4
-0.3
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.7
+0.3
+0.7
+0.1
-0.2
nln
NLN
-0.7
+0.0
+0.3
+0.4
+0.4
nf_with_fulln
NF_with_fullN
+0.6
+0.3
+0.2
-0.5
-0.1
nln
NLN
+0.4
+0.3
+0.3
-0.6
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.6
+0.2
+0.5
+0.3
+0.2
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