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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03278 and MPMX19_03279 are separated by 16 nucleotides
MPMX19_03279 and MPMX19_03280 are separated by 29 nucleotides
MPMX19_03280 and MPMX19_03281 overlap by 4 nucleotides
MPMX19_03281 and MPMX19_03282 are separated by 39 nucleotides
MPMX19_03278: MPMX19_03278 - hypothetical protein, at 623,896 to 624,954
_03278
MPMX19_03279: MPMX19_03279 - hypothetical protein, at 624,971 to 626,230
_03279
MPMX19_03280: MPMX19_03280 - Inner membrane ABC transporter permease protein YdcV, at 626,260 to 627,075
_03280
MPMX19_03281: MPMX19_03281 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 627,072 to 627,818
_03281
MPMX19_03282: MPMX19_03282 - HTH-type transcriptional regulator McbR, at 627,858 to 628,541
_03282
Group
Condition
MPMX19
_03278
MPMX19
_03279
MPMX19
_03280
MPMX19
_03281
MPMX19
_03282
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.1
-0.0
-1.2
-0.7
mgl
MGL
-0.3
-0.1
-0.5
-0.5
-0.3
mgl
MGL
-0.3
+0.1
-0.1
-0.9
-0.3
nf
NF
+0.1
-0.2
-0.4
-0.6
-0.3
nl-ccm
NL-CCM, start OD=0.3
-0.6
+0.0
-0.2
+0.0
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-0.0
-0.1
-0.8
-0.3
nl-ccm_agar
NL-CCM_agar
+0.1
+0.0
-0.1
-0.9
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.0
-0.2
-0.2
-0.7
mgl
MGL
-0.2
-0.0
-0.0
-0.8
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.0
+0.1
-0.9
-0.3
nf
NF
-0.2
+0.1
-0.3
-0.5
+0.1
mgl
MGL
+0.1
+0.1
+0.2
-0.9
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.1
+0.3
-0.6
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.2
+0.2
-0.2
-0.4
mgl
MGL
+0.2
-0.1
+0.3
-0.8
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.1
+0.1
-0.3
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
-0.1
-0.3
-0.0
-0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.2
-0.2
-0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
-0.2
+0.4
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
+0.1
-0.2
+0.2
-0.8
nln
NLN
-0.2
+0.1
-0.2
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.1
-0.1
-0.5
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.1
+0.1
-0.1
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.3
+0.1
-0.2
-0.2
-0.2
mgl
MGL
-0.3
+0.3
-0.2
+0.4
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
+0.1
-0.2
+0.3
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
+0.1
+0.1
+0.6
-0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.0
+0.1
+0.5
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
+0.1
+0.6
-0.2
nf_with_fulln
NF_with_fullN
+0.4
+0.1
-0.0
-0.3
+0.4
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