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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03270 and MPMX19_03271 overlap by 4 nucleotides
MPMX19_03271 and MPMX19_03272 are separated by 14 nucleotides
MPMX19_03272 and MPMX19_03273 overlap by 4 nucleotides
MPMX19_03273 and MPMX19_03274 are separated by 193 nucleotides
MPMX19_03270: MPMX19_03270 - Lactose transport system permease protein LacF, at 614,261 to 615,292
_03270
MPMX19_03271: MPMX19_03271 - hypothetical protein, at 615,289 to 616,344
_03271
MPMX19_03272: MPMX19_03272 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 616,359 to 617,402
_03272
MPMX19_03273: MPMX19_03273 - Oligosaccharide 4-alpha-D-glucosyltransferase, at 617,399 to 619,753
_03273
MPMX19_03274: MPMX19_03274 - hypothetical protein, at 619,947 to 620,942
_03274
Group
Condition
MPMX19
_03270
MPMX19
_03271
MPMX19
_03272
MPMX19
_03273
MPMX19
_03274
mgl
MGL
+0.2
+0.2
-0.1
-0.3
-1.6
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.2
-0.3
-0.0
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.5
-0.1
-0.0
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.1
-0.1
-0.0
-0.0
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.2
-0.2
+0.1
-0.3
nf
NF
-0.0
-0.1
-0.0
+0.2
-0.5
nl-ccm_agar
NL-CCM_agar
-0.1
+0.2
-0.1
-0.1
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.4
+0.2
-0.0
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.2
-0.2
-0.2
+0.2
nf_with_fulln
NF_with_fullN
+0.0
+0.0
+0.1
+0.0
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.1
+0.0
-0.1
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-0.1
-0.3
-0.1
+0.1
nf_with_fulln
NF_with_fullN
+0.1
-0.3
-0.2
+0.0
+0.3
nf
NF
+0.0
+0.1
+0.1
+0.1
-0.5
mgl
MGL
-0.1
+0.3
-0.0
+0.2
-0.4
mgl
MGL
-0.3
+0.2
-0.4
+0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.2
-0.2
-0.1
+0.3
nl-ccm
NL-CCM, start OD=0.1
+0.2
-0.0
+0.3
+0.0
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
+0.0
-0.1
+0.0
+0.3
nln
NLN
+0.2
-0.0
-0.1
-0.0
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
+0.0
+0.3
-0.1
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.3
+0.1
+0.1
-0.1
nl-ccm_agar
NL-CCM_agar
+0.2
+0.2
+0.1
-0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.0
+0.3
+0.2
-0.1
nl-ccm
NL-CCM, start OD=0.3
+0.0
+0.3
-0.1
+0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.0
+0.1
+0.3
+0.0
nf_with_fulln
NF_with_fullN
+0.2
+0.2
+0.0
+0.1
+0.2
nln
NLN
+0.1
+0.2
+0.0
+0.1
+0.3
nf_with_fulln
NF_with_fullN
+0.1
+0.4
-0.1
+0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.4
+0.1
-0.0
+0.2
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