Fitness for 5 genes in Azospirillum sp. SherDot2

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Top 30 experiments (either direction), sorted by average fitness

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500 ntMPMX19_03259 and MPMX19_03260 are separated by 31 nucleotidesMPMX19_03260 and MPMX19_03261 are separated by 73 nucleotidesMPMX19_03261 and MPMX19_03262 are separated by 185 nucleotidesMPMX19_03262 and MPMX19_03263 are separated by 443 nucleotides MPMX19_03259: MPMX19_03259 - Glycine betaine transport system permease protein OpuAB, at 600,348 to 601,196 _03259 MPMX19_03260: MPMX19_03260 - HTH-type transcriptional regulator CdhR, at 601,228 to 602,280 _03260 MPMX19_03261: MPMX19_03261 - 4-hydroxyproline 2-epimerase 2, at 602,354 to 603,352 _03261 MPMX19_03262: MPMX19_03262 - putative HTH-type transcriptional repressor ExuR, at 603,538 to 604,521 _03262 MPMX19_03263: MPMX19_03263 - hypothetical protein, at 604,965 to 606,041 _03263
Group Condition MPMX19_03259 MPMX19_03260 MPMX19_03261 MPMX19_03262 MPMX19_03263
nf_with10percent_fulln NF_with10percent_fullN +0.2 -0.1 -0.2 -1.0 -0.1
nf_with10percent_fulln NF_with10percent_fullN -0.4 +0.3 -0.2 -0.6 -0.1
nf_with10percent_fulln NF_with10percent_fullN -0.3 +0.2 +0.3 -0.8 +0.2
nf_with10percent_fulln NF_with10percent_fullN -0.3 +0.2 +0.2 -0.4 -0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.5 +0.3 +0.2 -0.0 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 -0.0 -0.2 +0.5 -0.2
nf_with_fulln NF_with_fullN +0.1 -0.5 +0.3 +0.2 -0.1
mgl MGL -0.1 -0.2 -0.1 +0.6 -0.1
nl-ccm_agar NL-CCM_agar -0.4 -0.0 +0.2 +0.5 -0.0
nf NF -0.4 +0.0 +0.0 +0.8 -0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.2 +0.2 -0.1 +0.4 +0.2
nln NLN +0.1 -0.1 +0.2 +0.4 -0.2
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.2 +0.2 +0.3 -0.0 +0.2
nl-ccm; spin-x control NL-CCM; spin-x control -0.1 -0.3 +0.1 +0.8 +0.0
nf NF +0.0 -0.1 +0.1 +0.6 -0.2
nln NLN -0.5 +0.2 +0.1 +0.7 +0.0
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.2 -0.1 -0.1 +0.7 -0.1
mgl MGL +0.1 -0.3 +0.1 +0.4 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 +0.2 +0.0 +0.5 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.2 -0.1 +0.1 +0.6 +0.0
nf_with_fulln NF_with_fullN -0.3 -0.2 +0.2 +1.2 -0.1
nl-ccm; spin-x control NL-CCM; spin-x control +0.2 +0.2 +0.1 +0.4 -0.2
nf_with10percent_fulln NF_with10percent_fullN -0.5 +0.2 +0.3 +0.5 +0.2
nl-ccm NL-CCM, start OD=0.3 -0.1 +0.2 -0.1 +0.6 +0.2
nl-ccm_agar NL-CCM_agar -0.1 +0.1 +0.1 +0.8 -0.0
nl-ccm; low oxygen NL-CCM; low oxygen +0.1 +0.1 -0.1 +0.7 +0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 +0.1 -0.1 +0.8 +0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.1 -0.1 +0.0 +0.9 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.3 +0.2 -0.1 +0.6 +0.1
nl-ccm; spin-x control NL-CCM; spin-x control +0.2 +0.3 -0.0 +0.7 +0.0
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