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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03257 and MPMX19_03258 are separated by 40 nucleotides
MPMX19_03258 and MPMX19_03259 overlap by 4 nucleotides
MPMX19_03259 and MPMX19_03260 are separated by 31 nucleotides
MPMX19_03260 and MPMX19_03261 are separated by 73 nucleotides
MPMX19_03257: MPMX19_03257 - Glycine betaine/proline betaine transport system ATP-binding protein ProV, at 598,353 to 599,438
_03257
MPMX19_03258: MPMX19_03258 - Glycine betaine/choline transport system permease protein OusW, at 599,479 to 600,351
_03258
MPMX19_03259: MPMX19_03259 - Glycine betaine transport system permease protein OpuAB, at 600,348 to 601,196
_03259
MPMX19_03260: MPMX19_03260 - HTH-type transcriptional regulator CdhR, at 601,228 to 602,280
_03260
MPMX19_03261: MPMX19_03261 - 4-hydroxyproline 2-epimerase 2, at 602,354 to 603,352
_03261
Group
Condition
MPMX19
_03257
MPMX19
_03258
MPMX19
_03259
MPMX19
_03260
MPMX19
_03261
nl-ccm_agar
NL-CCM_agar
-0.9
-0.1
-0.1
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
-0.2
-0.4
+0.3
-0.2
nf_with_fulln
NF_with_fullN
-0.5
-0.2
-0.3
-0.2
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.6
-0.0
-0.1
-0.3
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
-0.2
-0.3
+0.0
-0.0
nf
NF
-0.2
-0.2
-0.4
+0.0
+0.0
nf_with_fulln
NF_with_fullN
-0.1
-0.4
-0.3
+0.0
-0.0
nln
NLN
-0.3
-0.2
-0.5
+0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
-0.0
-0.2
+0.1
-0.1
nln
NLN
-0.4
-0.1
+0.1
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
-0.1
+0.2
-0.1
-0.1
mgl
MGL
-0.7
-0.0
-0.0
-0.0
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.7
-0.0
-0.1
+0.1
+0.0
nf_with_fulln
NF_with_fullN
-0.6
-0.1
-0.2
+0.1
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.7
-0.1
-0.0
+0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.1
-0.5
+0.3
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
+0.2
-0.5
+0.2
+0.3
nl-ccm_agar
NL-CCM_agar
-0.5
+0.1
-0.1
+0.1
+0.1
nln
NLN
-0.3
-0.1
+0.1
-0.1
+0.2
nln
NLN
-0.3
-0.1
+0.2
-0.1
+0.1
mgl
MGL
-0.3
+0.3
-0.0
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.1
-0.3
+0.2
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
+0.1
+0.2
+0.3
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.1
+0.2
-0.1
-0.2
nf_with_fulln
NF_with_fullN
+0.5
+0.0
+0.1
-0.5
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.4
-0.0
+0.1
+0.1
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
+0.1
+0.2
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.2
+0.1
+0.3
-0.0
mgl
MGL
+0.6
+0.0
+0.1
-0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.1
-0.3
+0.2
+0.3
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