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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03252 and MPMX19_03253 are separated by 2 nucleotides
MPMX19_03253 and MPMX19_03254 overlap by 8 nucleotides
MPMX19_03254 and MPMX19_03255 overlap by 4 nucleotides
MPMX19_03255 and MPMX19_03256 are separated by 88 nucleotides
MPMX19_03252: MPMX19_03252 - hypothetical protein, at 592,815 to 593,522
_03252
MPMX19_03253: MPMX19_03253 - 4-hydroxy-tetrahydrodipicolinate synthase, at 593,525 to 594,436
_03253
MPMX19_03254: MPMX19_03254 - NADP/NAD-dependent aldehyde dehydrogenase PuuC, at 594,429 to 595,946
_03254
MPMX19_03255: MPMX19_03255 - tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC, at 595,943 to 597,304
_03255
MPMX19_03256: MPMX19_03256 - hypothetical protein, at 597,393 to 598,244
_03256
Group
Condition
MPMX19
_03252
MPMX19
_03253
MPMX19
_03254
MPMX19
_03255
MPMX19
_03256
nl-ccm
NL-CCM, start OD=0.1
-1.0
-0.5
-0.2
-0.0
-0.0
mgl
MGL
-0.8
+0.1
-0.6
-0.1
-0.1
nln
NLN
-1.3
-0.1
+0.0
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.6
-0.2
-0.2
-0.0
-0.2
nf
NF
-0.9
-0.1
-0.1
+0.1
-0.1
nl-ccm_agar
NL-CCM_agar
-0.7
-0.1
-0.1
-0.0
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.9
+0.1
-0.2
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.6
-0.1
-0.3
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.8
-0.2
+0.2
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.6
-0.1
-0.1
-0.1
-0.1
nf
NF
-0.8
-0.1
-0.1
+0.2
-0.2
nln
NLN
-0.7
-0.2
-0.1
+0.0
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.9
+0.1
-0.2
-0.0
-0.0
nl-ccm
NL-CCM, start OD=0.3
-0.8
+0.0
-0.2
-0.0
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
-0.3
+0.1
-0.0
-0.1
nf_with_fulln
NF_with_fullN
-0.7
-0.2
+0.1
-0.1
-0.0
mgl
MGL
-0.2
-0.5
-0.4
+0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.8
+0.1
+0.1
-0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
-0.3
-0.0
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.6
-0.1
-0.3
+0.2
+0.1
nf_with_fulln
NF_with_fullN
-0.2
-0.3
+0.2
-0.3
-0.1
nf_with_fulln
NF_with_fullN
+0.1
-0.5
+0.0
-0.2
-0.3
nln
NLN
-0.6
-0.2
+0.1
-0.1
+0.1
nl-ccm_agar
NL-CCM_agar
-0.4
-0.2
+0.0
+0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.2
+0.3
+0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.2
+0.2
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.8
+0.6
-0.1
-0.2
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.4
-0.1
-0.0
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
+0.5
+0.1
-0.3
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.8
+0.6
-0.0
-0.4
+0.4
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