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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03248 and MPMX19_03249 are separated by 6 nucleotides
MPMX19_03249 and MPMX19_03250 are separated by 241 nucleotides
MPMX19_03250 and MPMX19_03251 are separated by 266 nucleotides
MPMX19_03251 and MPMX19_03252 are separated by 268 nucleotides
MPMX19_03248: MPMX19_03248 - 3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component, at 588,317 to 589,402
_03248
MPMX19_03249: MPMX19_03249 - Carnitine monooxygenase oxygenase subunit, at 589,409 to 590,644
_03249
MPMX19_03250: MPMX19_03250 - Glycine cleavage system transcriptional activator, at 590,886 to 591,812
_03250
MPMX19_03251: MPMX19_03251 - hypothetical protein, at 592,079 to 592,546
_03251
MPMX19_03252: MPMX19_03252 - hypothetical protein, at 592,815 to 593,522
_03252
Group
Condition
MPMX19
_03248
MPMX19
_03249
MPMX19
_03250
MPMX19
_03251
MPMX19
_03252
nl-ccm_agar
NL-CCM_agar
+0.0
-0.1
-0.0
-0.6
-0.7
nl-ccm
NL-CCM, start OD=0.1
+0.0
+0.1
+0.1
-0.6
-1.0
nln
NLN
-0.1
+0.2
+0.2
-0.3
-1.3
nf
NF
-0.1
-0.0
-0.2
-0.4
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
+0.2
+0.4
-0.7
-0.9
nl-ccm
NL-CCM, start OD=0.3
+0.1
+0.1
-0.2
-0.1
-0.8
mgl
MGL
+0.2
-0.1
+0.5
-1.2
-0.2
mgl
MGL
+0.2
-0.0
-0.1
-0.6
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.0
+0.1
-0.3
-0.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.2
+0.0
-0.2
-0.9
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.1
+0.1
-0.2
-0.8
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
+0.2
+0.4
-0.9
-0.4
nl-ccm
NL-CCM, start OD=0.1
-0.1
+0.1
-0.4
+0.2
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.2
+0.0
-0.5
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.2
+0.1
-0.3
-0.3
mgl
MGL
+0.2
+0.1
+0.2
-0.3
-0.8
nln
NLN
+0.1
-0.1
-0.3
+0.4
-0.5
nln
NLN
+0.1
+0.0
-0.2
+0.3
-0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.2
+0.2
-0.3
-0.6
nf_with_fulln
NF_with_fullN
+0.0
+0.1
+0.2
+0.1
-0.7
nln
NLN
+0.1
-0.1
+0.1
+0.5
-0.7
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.4
-0.2
-0.2
+0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.3
+0.3
-0.3
-0.5
mgl
MGL
-0.2
+0.1
+0.3
-0.5
+0.2
nln
NLN
+0.1
-0.1
-0.2
+0.5
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.3
-0.2
-0.3
+0.8
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.3
+0.3
-0.4
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.4
+0.3
+0.3
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.2
+0.2
-0.0
+0.8
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.0
+0.3
+0.7
+0.3
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