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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03160 and MPMX19_03161 are separated by 114 nucleotides
MPMX19_03161 and MPMX19_03162 are separated by 86 nucleotides
MPMX19_03162 and MPMX19_03163 are separated by 93 nucleotides
MPMX19_03163 and MPMX19_03164 are separated by 7 nucleotides
MPMX19_03160: MPMX19_03160 - Arsenate reductase, at 452,817 to 453,347
_03160
MPMX19_03161: MPMX19_03161 - Quercetin 2,3-dioxygenase, at 453,462 to 454,160
_03161
MPMX19_03162: MPMX19_03162 - Sensor histidine kinase RcsC, at 454,247 to 455,728
_03162
MPMX19_03163: MPMX19_03163 - hypothetical protein, at 455,822 to 456,502
_03163
MPMX19_03164: MPMX19_03164 - hypothetical protein, at 456,510 to 456,827
_03164
Group
Condition
MPMX19
_03160
MPMX19
_03161
MPMX19
_03162
MPMX19
_03163
MPMX19
_03164
mgl
MGL
-0.6
-0.5
-0.3
-0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.0
-0.8
-0.5
-0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
-0.2
-0.3
-0.2
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
-0.2
-0.2
-0.3
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.4
-0.2
-0.0
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
-0.3
-0.1
-0.2
-0.1
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.3
-0.3
-0.3
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.5
-0.5
-0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.2
-0.2
+0.0
-0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.4
+0.0
-0.2
-0.2
nl-ccm_agar
NL-CCM_agar
-0.2
-0.3
-0.3
+0.0
+0.0
nl-ccm_agar
NL-CCM_agar
-0.3
-0.4
+0.0
-0.2
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.4
+0.1
-0.2
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.4
-0.3
-0.1
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
-0.2
+0.1
-0.2
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.1
+0.2
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.0
-0.5
-0.8
+0.3
mgl
MGL
-0.2
-0.0
-0.7
+0.0
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.0
-0.5
+0.3
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.2
+0.2
-0.3
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.4
-0.0
+0.4
-0.0
mgl
MGL
-0.3
-0.3
-0.1
+0.2
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.3
-0.2
-0.1
+0.2
mgl
MGL
-0.3
+0.2
+0.5
-0.2
-0.4
nf_with_fulln
NF_with_fullN
+0.5
+0.2
-0.3
-0.4
-0.1
nf_with_fulln
NF_with_fullN
+0.5
+0.0
+0.0
-0.5
-0.1
mgl
MGL
-0.2
-0.0
+0.0
-0.2
+0.4
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.2
+0.3
-0.2
+0.2
mgl
MGL
-0.1
-0.0
-0.4
+0.1
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.1
-0.2
-0.1
+0.3
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