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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03147 and MPMX19_03148 are separated by 184 nucleotides
MPMX19_03148 and MPMX19_03149 are separated by 41 nucleotides
MPMX19_03149 and MPMX19_03150 overlap by 4 nucleotides
MPMX19_03150 and MPMX19_03151 overlap by 4 nucleotides
MPMX19_03147: MPMX19_03147 - Lipopolysaccharide assembly protein B, at 437,840 to 440,929
_03147
MPMX19_03148: MPMX19_03148 - hypothetical protein, at 441,114 to 442,661
_03148
MPMX19_03149: MPMX19_03149 - hypothetical protein, at 442,703 to 443,422
_03149
MPMX19_03150: MPMX19_03150 - hypothetical protein, at 443,419 to 444,855
_03150
MPMX19_03151: MPMX19_03151 - hypothetical protein, at 444,852 to 446,009
_03151
Group
Condition
MPMX19
_03147
MPMX19
_03148
MPMX19
_03149
MPMX19
_03150
MPMX19
_03151
mgl
MGL
-0.2
-0.4
-0.6
-0.5
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.2
-0.9
-0.1
-0.2
mgl
MGL
-0.0
-0.3
-0.3
-0.0
-0.2
mgl
MGL
-0.5
-0.1
-0.1
-0.3
+0.4
mgl
MGL
-0.0
+0.0
-0.6
+0.2
+0.0
nl-ccm_agar
NL-CCM_agar
-0.2
-0.1
-0.0
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.2
+0.4
+0.1
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.0
-0.3
-0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.2
-0.3
+0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.1
-0.0
-0.1
+0.2
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.1
-0.3
+0.0
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.1
+0.3
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.3
+0.3
-0.0
-0.2
nl-ccm
NL-CCM, start OD=0.3
+0.3
+0.0
-0.2
-0.1
+0.2
nln
NLN
+0.1
-0.1
-0.2
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.2
-0.2
-0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.2
-0.1
+0.2
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
+0.0
-0.2
+0.1
+0.3
nln
NLN
-0.1
-0.0
+0.2
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.1
+0.2
-0.0
+0.3
nl-ccm
NL-CCM, start OD=0.3
-0.0
-0.1
+0.3
+0.1
+0.3
nln
NLN
-0.0
+0.0
+0.2
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.0
+0.4
+0.0
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.0
+0.3
-0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.3
+0.1
+0.2
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.0
+0.5
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
+0.1
+0.4
+0.1
+0.2
nln
NLN
+0.1
-0.1
+0.4
+0.2
+0.1
nf_with_fulln
NF_with_fullN
+0.1
+0.0
+0.3
+0.2
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.0
+0.5
+0.1
+0.2
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