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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03125 and MPMX19_03126 are separated by 20 nucleotides
MPMX19_03126 and MPMX19_03127 overlap by 20 nucleotides
MPMX19_03127 and MPMX19_03128 are separated by 59 nucleotides
MPMX19_03128 and MPMX19_03129 are separated by 357 nucleotides
MPMX19_03125: MPMX19_03125 - Citrate lyase alpha chain, at 412,405 to 413,907
_03125
MPMX19_03126: MPMX19_03126 - Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase, at 413,928 to 414,449
_03126
MPMX19_03127: MPMX19_03127 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase, at 414,430 to 415,404
_03127
MPMX19_03128: MPMX19_03128 - hypothetical protein, at 415,464 to 416,042
_03128
MPMX19_03129: MPMX19_03129 - Citrate/malate transporter, at 416,400 to 417,761
_03129
Group
Condition
MPMX19
_03125
MPMX19
_03126
MPMX19
_03127
MPMX19
_03128
MPMX19
_03129
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.7
-0.8
+0.1
-0.1
nf
NF
-0.0
-0.4
-0.7
-0.2
-0.1
nl-ccm_agar
NL-CCM_agar
+0.0
-0.3
-0.3
-0.5
-0.2
mgl
MGL
+0.2
-0.8
+0.6
-1.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.1
-0.3
-0.8
+0.0
nl-ccm
NL-CCM, start OD=0.3
+0.0
+0.1
-1.0
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.2
-0.3
-0.5
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.1
-0.3
-0.5
+0.2
mgl
MGL
+0.4
-0.4
+0.4
-1.3
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.2
-1.3
+0.5
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-0.3
+0.2
-0.6
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.5
-0.2
+0.3
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.4
-0.1
-0.7
+0.1
nln
NLN
-0.1
+0.3
-0.1
-0.5
+0.3
nln
NLN
+0.0
+0.0
+0.3
-0.6
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.3
-0.7
+0.3
+0.2
nln
NLN
+0.2
-0.3
+0.6
-0.3
-0.0
mgl
MGL
+0.2
-0.7
+0.1
+0.1
+0.6
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
+0.5
+0.5
-0.7
+0.1
mgl
MGL
-0.2
+0.1
-0.3
+0.1
+0.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.4
+0.2
-0.3
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.2
+0.4
+0.5
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.1
+0.7
-0.3
+0.5
mgl
MGL
+0.1
-0.8
+0.6
+0.2
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.4
+0.5
+0.3
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.4
+0.5
-0.4
+0.2
nf_with_fulln
NF_with_fullN
+0.1
-0.2
+0.5
+0.2
+0.2
mgl
MGL
+0.3
+0.4
-0.3
+0.2
+0.5
nln
NLN
+0.1
+0.0
+0.5
+0.3
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.3
+0.4
+0.2
+0.2
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