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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03121 and MPMX19_03122 are separated by 221 nucleotides
MPMX19_03122 and MPMX19_03123 are separated by 59 nucleotides
MPMX19_03123 and MPMX19_03124 overlap by 4 nucleotides
MPMX19_03124 and MPMX19_03125 are separated by 16 nucleotides
MPMX19_03121: MPMX19_03121 - NADP-dependent malic enzyme, at 407,523 to 409,823
_03121
MPMX19_03122: MPMX19_03122 - [Citrate [pro-3S]-lyase] ligase, at 410,045 to 411,163
_03122
MPMX19_03123: MPMX19_03123 - Citrate lyase acyl carrier protein, at 411,223 to 411,519
_03123
MPMX19_03124: MPMX19_03124 - Citrate lyase subunit beta, at 411,516 to 412,388
_03124
MPMX19_03125: MPMX19_03125 - Citrate lyase alpha chain, at 412,405 to 413,907
_03125
Group
Condition
MPMX19
_03121
MPMX19
_03122
MPMX19
_03123
MPMX19
_03124
MPMX19
_03125
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.1
-1.1
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.2
-1.0
+0.3
-0.2
nf_with_fulln
NF_with_fullN
+0.2
-0.5
-0.7
+0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.5
-0.8
+0.2
-0.0
nln
NLN
+0.1
+0.0
-0.9
-0.3
+0.2
nf_with_fulln
NF_with_fullN
+0.1
-0.2
-0.5
-0.2
-0.1
nf_with_fulln
NF_with_fullN
+0.2
-0.1
-1.0
-0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.4
-0.5
+0.3
+0.0
nln
NLN
+0.2
-0.2
-0.8
-0.0
+0.1
nf_with_fulln
NF_with_fullN
+0.2
-0.2
-0.5
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.3
-0.0
+0.3
-0.8
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.2
+0.5
-0.4
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.1
+0.6
-0.4
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.1
+0.7
-0.4
+0.0
nl-ccm_agar
NL-CCM_agar
+0.0
-0.2
+0.7
-0.2
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.0
+0.8
-0.3
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.3
+0.9
-0.2
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.0
+0.6
-0.2
+0.1
mgl
MGL
+0.0
+0.0
+0.7
-0.1
+0.4
nf
NF
-0.0
-0.0
+0.7
+0.1
+0.2
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.0
+0.8
+0.1
+0.1
mgl
MGL
+0.2
+0.2
+0.9
-0.0
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
+0.0
+0.8
+0.1
+0.0
mgl
MGL
+0.4
+0.1
+0.7
-0.3
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
-0.0
+1.0
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
-0.0
+0.9
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.1
+0.9
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.2
+1.0
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.0
+1.2
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.1
+1.4
+0.1
+0.1
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