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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03112 and MPMX19_03113 are separated by 5 nucleotides
MPMX19_03113 and MPMX19_03114 overlap by 4 nucleotides
MPMX19_03114 and MPMX19_03115 overlap by 23 nucleotides
MPMX19_03115 and MPMX19_03116 are separated by 50 nucleotides
MPMX19_03112: MPMX19_03112 - Ribonuclease BN, at 397,691 to 398,431
_03112
MPMX19_03113: MPMX19_03113 - hypothetical protein, at 398,437 to 399,270
_03113
MPMX19_03114: MPMX19_03114 - hypothetical protein, at 399,267 to 400,196
_03114
MPMX19_03115: MPMX19_03115 - hypothetical protein, at 400,174 to 401,337
_03115
MPMX19_03116: MPMX19_03116 - Vitamin B12 import ATP-binding protein BtuD, at 401,388 to 402,500
_03116
Group
Condition
MPMX19
_03112
MPMX19
_03113
MPMX19
_03114
MPMX19
_03115
MPMX19
_03116
nf_with10percent_fulln
NF_with10percent_fullN
-0.9
+0.1
-1.0
+0.1
+0.0
mgl
MGL
-0.2
-0.6
-0.6
+0.0
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.3
-0.5
-0.4
-0.1
mgl
MGL
+0.2
+0.1
-0.5
-0.1
-0.7
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.0
-0.5
+0.1
-0.5
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.1
-0.2
-0.0
-0.8
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
+0.0
+0.1
+0.0
-0.6
mgl
MGL
+0.2
+0.6
-0.4
-0.1
-0.9
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.2
-0.7
+0.3
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.0
-0.3
+0.0
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
+0.4
+0.1
+0.1
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.3
+0.4
+0.1
-0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
+0.2
-0.4
+0.0
-0.4
nln
NLN
+0.0
+0.2
-0.4
+0.2
-0.3
mgl
MGL
+0.5
+0.4
-0.1
-0.0
-0.9
nf_with_fulln
NF_with_fullN
-0.3
-0.3
-0.2
+0.2
+0.3
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.0
+0.4
+0.1
-0.4
nln
NLN
+0.4
+0.1
-0.2
+0.0
+0.3
nl-ccm
NL-CCM, start OD=0.3
+0.6
-0.2
-0.1
+0.1
+0.2
nf
NF
+0.0
+0.2
+0.7
+0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.3
+0.4
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.5
-0.1
+0.3
+0.2
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.4
-0.1
+0.2
+0.4
mgl
MGL
+0.4
+0.6
-1.0
+0.2
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.1
+0.3
+0.3
-0.1
nln
NLN
+0.3
+0.3
-0.2
+0.1
+0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.5
-0.0
+0.2
+0.1
+0.3
nf_with_fulln
NF_with_fullN
+0.2
+0.2
+0.3
+0.2
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
+0.2
+0.4
+0.0
+0.2
mgl
MGL
+0.6
+0.4
+0.4
+0.3
-0.2
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