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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03106 and MPMX19_03107 are separated by 5 nucleotides
MPMX19_03107 and MPMX19_03108 are separated by 14 nucleotides
MPMX19_03108 and MPMX19_03109 are separated by 58 nucleotides
MPMX19_03109 and MPMX19_03110 overlap by 4 nucleotides
MPMX19_03106: MPMX19_03106 - hypothetical protein, at 386,331 to 387,962
_03106
MPMX19_03107: MPMX19_03107 - hypothetical protein, at 387,968 to 389,068
_03107
MPMX19_03108: MPMX19_03108 - hypothetical protein, at 389,083 to 394,401
_03108
MPMX19_03109: MPMX19_03109 - hypothetical protein, at 394,460 to 394,738
_03109
MPMX19_03110: MPMX19_03110 - 3-oxoacyl-[acyl-carrier-protein] synthase 2, at 394,735 to 395,970
_03110
Group
Condition
MPMX19
_03106
MPMX19
_03107
MPMX19
_03108
MPMX19
_03109
MPMX19
_03110
mgl
MGL
-0.1
+0.1
-0.0
-1.7
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.3
-0.1
-0.7
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.0
-0.1
-1.1
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.1
-0.0
-1.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.2
-0.2
-0.8
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.0
-0.0
-0.5
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.1
-0.1
-0.3
-0.4
mgl
MGL
+0.3
+0.1
-0.0
-1.0
+0.0
nln
NLN
+0.2
-0.1
+0.1
-0.4
-0.1
mgl
MGL
-0.2
-0.0
+0.1
-0.6
+0.3
mgl
MGL
+0.1
-0.5
+0.1
+0.2
-0.1
nf_with_fulln
NF_with_fullN
+0.3
+0.1
-0.0
-0.4
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.1
+0.2
-0.3
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.0
+0.1
+0.1
+0.4
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.0
+0.0
+0.7
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.0
+0.0
+0.5
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.0
+0.1
+0.8
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.1
+0.0
+0.5
+0.1
nf
NF
+0.2
+0.0
+0.1
+0.6
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
+0.1
+0.0
+0.3
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.3
+0.1
+0.3
+0.1
nl-ccm_agar
NL-CCM_agar
+0.0
+0.2
+0.1
+0.5
-0.0
nf
NF
+0.1
+0.0
+0.1
+0.4
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
+0.1
+0.2
+0.6
+0.1
nf_with_fulln
NF_with_fullN
+0.2
+0.2
+0.1
+0.3
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.3
+0.1
+0.0
+0.5
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.2
+0.1
+0.5
+0.1
nf_with_fulln
NF_with_fullN
+0.2
+0.1
+0.2
+0.2
+0.3
nf
NF
+0.1
+0.2
+0.1
+0.4
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.2
+0.2
+0.9
+0.1
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