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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03097 and MPMX19_03098 overlap by 8 nucleotides
MPMX19_03098 and MPMX19_03099 are separated by 162 nucleotides
MPMX19_03099 and MPMX19_03100 are separated by 445 nucleotides
MPMX19_03100 and MPMX19_03101 are separated by 10 nucleotides
MPMX19_03097: MPMX19_03097 - hypothetical protein, at 367,563 to 368,036
_03097
MPMX19_03098: MPMX19_03098 - hypothetical protein, at 368,029 to 369,165
_03098
MPMX19_03099: MPMX19_03099 - hypothetical protein, at 369,328 to 370,107
_03099
MPMX19_03100: MPMX19_03100 - hypothetical protein, at 370,553 to 371,212
_03100
MPMX19_03101: MPMX19_03101 - hypothetical protein, at 371,223 to 371,885
_03101
Group
Condition
MPMX19
_03097
MPMX19
_03098
MPMX19
_03099
MPMX19
_03100
MPMX19
_03101
mgl
MGL
+0.2
+0.2
-0.3
-0.2
-0.9
mgl
MGL
+0.3
-0.5
-0.0
-0.3
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.4
+0.1
-0.3
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.1
+0.2
-0.3
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.1
-0.1
-0.3
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.2
-0.2
-0.4
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.5
+0.3
-0.4
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.4
+0.4
-0.2
-0.6
nf_with_fulln
NF_with_fullN
-0.1
+0.3
-0.2
-0.3
-0.0
mgl
MGL
+0.6
-0.4
-0.1
-0.2
-0.2
nf
NF
+0.2
+0.2
+0.1
-0.4
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.2
+0.2
+0.2
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.0
+0.2
+0.1
-0.5
nln
NLN
-0.3
+0.1
+0.0
+0.4
-0.2
nf_with_fulln
NF_with_fullN
-0.2
+0.1
-0.2
-0.1
+0.4
nf_with_fulln
NF_with_fullN
-0.1
-0.1
-0.2
+0.3
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
+0.2
+0.3
-0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.1
+0.0
+0.4
-0.4
nln
NLN
-0.2
-0.2
+0.1
+0.3
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.4
-0.1
-0.3
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
+0.3
+0.1
-0.1
+0.4
nl-ccm_agar
NL-CCM_agar
+0.2
-0.0
-0.2
+0.6
+0.0
nf_with_fulln
NF_with_fullN
-0.1
+0.3
+0.0
+0.0
+0.5
nl-ccm_agar
NL-CCM_agar
+0.3
+0.1
-0.0
+0.5
-0.2
mgl
MGL
-0.1
-0.0
+0.4
+0.5
-0.1
nln
NLN
-0.1
+0.2
+0.1
+0.4
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.0
+0.2
+0.5
+0.1
nl-ccm_agar
NL-CCM_agar
+0.1
+0.0
+0.2
+0.5
+0.1
nl-ccm_agar
NL-CCM_agar
+0.2
+0.2
-0.0
+0.3
+0.2
nl-ccm
NL-CCM, start OD=0.3
+0.2
+0.2
-0.1
+0.5
+0.3
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