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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03092 and MPMX19_03093 overlap by 4 nucleotides
MPMX19_03093 and MPMX19_03094 overlap by 4 nucleotides
MPMX19_03094 and MPMX19_03095 are separated by 10 nucleotides
MPMX19_03095 and MPMX19_03096 are separated by 13 nucleotides
MPMX19_03092: MPMX19_03092 - High-affinity zinc uptake system membrane protein ZnuB, at 364,084 to 364,974
_03092
MPMX19_03093: MPMX19_03093 - Manganese import ATP-binding protein ScaC, at 364,971 to 365,711
_03093
MPMX19_03094: MPMX19_03094 - Metal ABC transporter substrate-binding lipoprotein, at 365,708 to 366,625
_03094
MPMX19_03095: MPMX19_03095 - hypothetical protein, at 366,636 to 367,229
_03095
MPMX19_03096: MPMX19_03096 - hypothetical protein, at 367,243 to 367,566
_03096
Group
Condition
MPMX19
_03092
MPMX19
_03093
MPMX19
_03094
MPMX19
_03095
MPMX19
_03096
mgl
MGL
+0.1
-0.9
+0.1
-1.5
-1.8
nf_with10percent_fulln
NF_with10percent_fullN
-1.0
-0.7
-0.2
-0.4
-1.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
+0.1
+0.3
-2.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
-0.9
-0.4
+0.9
-0.7
mgl
MGL
-0.4
-0.1
+0.1
+0.1
-1.2
mgl
MGL
-0.3
+0.1
+0.0
-0.6
-0.8
mgl
MGL
+0.1
+0.9
+0.1
-1.1
-1.4
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
-0.1
+0.1
-0.7
-0.6
mgl
MGL
+0.3
-0.6
-0.1
+0.2
-1.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
+0.4
+0.1
-0.1
-1.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.2
+0.2
+0.0
-1.1
mgl
MGL
-0.4
-0.9
+0.1
+0.6
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.3
-0.0
+0.5
-0.9
nln
NLN
+0.2
+0.1
-0.0
+0.7
-0.8
nln
NLN
+0.2
+0.2
+0.1
+0.6
-0.8
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
+0.3
+0.3
+0.9
-1.3
nl-ccm_agar
NL-CCM_agar
+0.4
-0.6
+0.3
+0.4
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.3
+0.1
+0.6
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.2
+0.1
+0.7
-0.2
nln
NLN
+0.3
+0.4
-0.1
+0.7
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.4
-0.2
+1.5
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.5
+0.3
-0.5
+0.7
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.3
-0.4
+1.3
-0.2
nl-ccm
NL-CCM, start OD=0.1
+0.3
+0.3
+0.3
+0.4
+0.4
nf_with_fulln
NF_with_fullN
+0.4
-0.3
-0.1
+0.9
+0.8
nf_with_fulln
NF_with_fullN
+0.2
-0.0
-0.1
+0.3
+1.4
nf_with_fulln
NF_with_fullN
+0.4
-0.0
+0.1
+1.0
+0.2
nf
NF
+0.1
+0.3
+0.1
+1.0
+0.6
nf_with_fulln
NF_with_fullN
+0.4
-0.1
+0.0
+1.2
+0.7
nl-ccm_agar
NL-CCM_agar
+0.2
+0.2
+0.1
+0.9
+0.8
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