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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03082 and MPMX19_03083 are separated by 235 nucleotides
MPMX19_03083 and MPMX19_03084 are separated by 92 nucleotides
MPMX19_03084 and MPMX19_03085 are separated by 123 nucleotides
MPMX19_03085 and MPMX19_03086 are separated by 66 nucleotides
MPMX19_03082: MPMX19_03082 - ECF RNA polymerase sigma factor SigE, at 351,283 to 351,807
_03082
MPMX19_03083: MPMX19_03083 - hypothetical protein, at 352,043 to 352,249
_03083
MPMX19_03084: MPMX19_03084 - Catalase-peroxidase, at 352,342 to 354,573
_03084
MPMX19_03085: MPMX19_03085 - Hydrogen peroxide-inducible genes activator, at 354,697 to 355,593
_03085
MPMX19_03086: MPMX19_03086 - Ferric-pseudobactin BN7/BN8 receptor, at 355,660 to 358,197
_03086
Group
Condition
MPMX19
_03082
MPMX19
_03083
MPMX19
_03084
MPMX19
_03085
MPMX19
_03086
mgl
MGL
-0.5
-1.1
-0.1
-2.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.3
+0.1
-0.8
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.2
+0.0
-0.6
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.3
+0.4
-0.5
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.2
+0.1
-0.8
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.4
-0.1
+0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
-0.4
-0.1
+0.8
-0.1
nf
NF
+0.0
+0.1
+0.2
-0.6
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.5
+0.1
-1.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.5
+0.2
-1.0
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.4
-0.2
-0.3
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
-0.7
+0.1
+0.4
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.5
+0.3
+0.2
+0.1
mgl
MGL
-0.3
+0.7
+0.0
-0.3
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.5
+0.0
-0.4
+0.2
nl-ccm_agar
NL-CCM_agar
+0.3
-0.4
+0.1
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
+0.1
+0.1
+0.5
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.4
-0.3
+0.4
+0.0
nf_with_fulln
NF_with_fullN
+0.4
-0.1
-0.0
+0.6
-0.1
nln
NLN
-0.1
+0.3
+0.2
+0.4
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.2
+0.5
+0.3
-0.2
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.5
-0.1
+0.3
+0.1
nf_with_fulln
NF_with_fullN
+0.1
+0.0
-0.1
+1.0
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
+0.0
+0.2
+0.7
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.0
+0.3
-0.0
+0.6
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
+0.5
+0.2
+0.5
+0.1
nln
NLN
+0.1
+0.5
+0.0
+0.6
-0.0
mgl
MGL
+0.0
-0.2
+0.5
+0.9
+0.0
nln
NLN
+0.2
+0.3
+0.0
+0.8
-0.1
nl-ccm_agar
NL-CCM_agar
-0.1
+0.6
+0.1
+0.6
+0.1
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