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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03078 and MPMX19_03079 overlap by 4 nucleotides
MPMX19_03079 and MPMX19_03080 are separated by 57 nucleotides
MPMX19_03080 and MPMX19_03081 are separated by 147 nucleotides
MPMX19_03081 and MPMX19_03082 are separated by 87 nucleotides
MPMX19_03078: MPMX19_03078 - hypothetical protein, at 346,130 to 346,315
_03078
MPMX19_03079: MPMX19_03079 - hypothetical protein, at 346,312 to 347,457
_03079
MPMX19_03080: MPMX19_03080 - Ferrichrome receptor FcuA, at 347,515 to 349,992
_03080
MPMX19_03081: MPMX19_03081 - Protein FecR, at 350,140 to 351,195
_03081
MPMX19_03082: MPMX19_03082 - ECF RNA polymerase sigma factor SigE, at 351,283 to 351,807
_03082
Group
Condition
MPMX19
_03078
MPMX19
_03079
MPMX19
_03080
MPMX19
_03081
MPMX19
_03082
mgl
MGL
N.D.
-0.3
-0.2
-1.4
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.3
-0.1
-0.6
-0.3
mgl
MGL
N.D.
+0.0
+0.1
-0.9
-0.5
mgl
MGL
N.D.
-0.2
-0.3
-0.3
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.2
-0.1
-0.5
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.4
-0.1
-0.3
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.4
-0.1
-0.1
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.3
-0.3
+0.1
-0.3
nf
NF
N.D.
-0.2
+0.1
-0.6
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.4
+0.2
-0.6
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.1
-0.2
+0.2
-0.5
nl-ccm_agar
NL-CCM_agar
N.D.
-0.3
+0.0
-0.3
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.3
+0.2
-0.1
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.1
-0.1
-0.6
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.2
-0.0
-0.9
+0.0
nl-ccm
NL-CCM, start OD=0.1
N.D.
-0.2
+0.1
-0.6
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.0
+0.2
-0.6
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.0
-0.1
-0.7
+0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.0
+0.2
-0.9
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.5
-0.1
+0.3
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.0
+0.0
-0.7
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.2
+0.1
-0.4
+0.2
nln
NLN
N.D.
+0.1
+0.1
-0.5
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.1
+0.1
-0.3
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.4
+0.1
-0.0
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.3
+0.1
+0.4
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.3
+0.3
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.5
+0.1
+0.3
+0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.1
+0.2
+0.3
+0.2
nf_with_fulln
NF_with_fullN
N.D.
+0.2
+0.1
+0.4
+0.1
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