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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03065 and MPMX19_03066 overlap by 11 nucleotides
MPMX19_03066 and MPMX19_03067 are separated by 192 nucleotides
MPMX19_03067 and MPMX19_03068 overlap by 4 nucleotides
MPMX19_03068 and MPMX19_03069 are separated by 2 nucleotides
MPMX19_03065: MPMX19_03065 - Nucleoid occlusion protein, at 329,960 to 330,847
_03065
MPMX19_03066: MPMX19_03066 - hypothetical protein, at 330,837 to 331,850
_03066
MPMX19_03067: MPMX19_03067 - hypothetical protein, at 332,043 to 333,314
_03067
MPMX19_03068: MPMX19_03068 - hypothetical protein, at 333,311 to 334,153
_03068
MPMX19_03069: MPMX19_03069 - hypothetical protein, at 334,156 to 334,749
_03069
Group
Condition
MPMX19
_03065
MPMX19
_03066
MPMX19
_03067
MPMX19
_03068
MPMX19
_03069
mgl
MGL
N.D.
N.D.
+0.2
+0.1
-2.3
mgl
MGL
N.D.
N.D.
-1.0
-0.5
-0.4
mgl
MGL
N.D.
N.D.
+0.1
-0.2
-1.8
mgl
MGL
N.D.
N.D.
-0.3
-0.1
-1.4
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
-0.5
-0.1
-1.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.5
-0.0
-0.9
mgl
MGL
N.D.
N.D.
-1.2
+0.2
-0.3
mgl
MGL
N.D.
N.D.
-0.6
-0.2
-0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.4
-0.1
-0.4
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.2
+0.1
-0.8
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
-0.2
-0.2
-0.6
nln
NLN
N.D.
N.D.
-0.0
+0.2
-1.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.2
-0.1
-0.6
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
+0.2
-0.0
-0.8
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.1
+0.2
-0.6
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
+0.1
+0.3
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.6
+0.1
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
+0.4
+0.2
-0.6
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.3
-0.3
+0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
+0.1
-0.1
+0.8
nln
NLN
N.D.
N.D.
+0.4
-0.1
+0.6
nln
NLN
N.D.
N.D.
+0.4
+0.2
+0.4
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.4
+0.3
+0.3
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.3
+0.3
+0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
+0.0
+0.2
+0.9
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.6
+0.2
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.3
+0.1
+0.8
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.3
+0.2
+0.8
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.6
+0.4
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.8
-0.2
+0.9
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