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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03057 and MPMX19_03058 are separated by 86 nucleotides
MPMX19_03058 and MPMX19_03059 are separated by 238 nucleotides
MPMX19_03059 and MPMX19_03060 are separated by 13 nucleotides
MPMX19_03060 and MPMX19_03061 overlap by 14 nucleotides
MPMX19_03057: MPMX19_03057 - Nitrous-oxide reductase, at 320,338 to 322,287
_03057
MPMX19_03058: MPMX19_03058 - hypothetical protein, at 322,374 to 324,695
_03058
MPMX19_03059: MPMX19_03059 - hypothetical protein, at 324,934 to 325,161
_03059
MPMX19_03060: MPMX19_03060 - Ferredoxin-type protein NapF, at 325,175 to 325,720
_03060
MPMX19_03061: MPMX19_03061 - Chaperone NapD, at 325,707 to 326,009
_03061
Group
Condition
MPMX19
_03057
MPMX19
_03058
MPMX19
_03059
MPMX19
_03060
MPMX19
_03061
mgl
MGL
-0.4
-0.1
N.D.
N.D.
N.D.
mgl
MGL
+0.0
-0.4
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.3
N.D.
N.D.
N.D.
mgl
MGL
-0.1
-0.3
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.2
N.D.
N.D.
N.D.
nf
NF
-0.1
-0.2
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.2
N.D.
N.D.
N.D.
mgl
MGL
-0.1
-0.2
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
-0.3
N.D.
N.D.
N.D.
nf
NF
-0.1
-0.2
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
-0.3
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
-0.1
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.2
N.D.
N.D.
N.D.
nln
NLN
-0.1
-0.2
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.2
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.1
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
-0.2
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.2
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.1
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.2
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
-0.0
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.2
N.D.
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.2
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
+0.1
-0.2
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.2
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.0
+0.2
N.D.
N.D.
N.D.
mgl
MGL
+0.2
-0.1
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.1
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.1
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.1
N.D.
N.D.
N.D.
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