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Protein
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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03014 and MPMX19_03015 are separated by 140 nucleotides
MPMX19_03015 and MPMX19_03016 are separated by 124 nucleotides
MPMX19_03016 and MPMX19_03017 overlap by 11 nucleotides
MPMX19_03017 and MPMX19_03018 are separated by 86 nucleotides
MPMX19_03014: MPMX19_03014 - Transcriptional activatory protein AadR, at 278,463 to 279,227
_03014
MPMX19_03015: MPMX19_03015 - Transcriptional regulatory protein TdiR, at 279,368 to 279,808
_03015
MPMX19_03016: MPMX19_03016 - Response regulator protein TmoT, at 279,933 to 280,631
_03016
MPMX19_03017: MPMX19_03017 - Adaptive-response sensory-kinase SasA, at 280,621 to 282,225
_03017
MPMX19_03018: MPMX19_03018 - UV DNA damage endonuclease, at 282,312 to 283,388
_03018
Group
Condition
MPMX19
_03014
MPMX19
_03015
MPMX19
_03016
MPMX19
_03017
MPMX19
_03018
mgl
MGL
+0.1
N.D.
N.D.
-0.2
-0.7
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
N.D.
N.D.
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
N.D.
N.D.
-0.4
-0.2
nf
NF
-0.2
N.D.
N.D.
-0.2
-0.4
mgl
MGL
+0.3
N.D.
N.D.
-0.1
-0.8
mgl
MGL
-0.1
N.D.
N.D.
+0.4
-0.7
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
N.D.
N.D.
+0.1
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
N.D.
N.D.
-0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.2
N.D.
N.D.
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
N.D.
N.D.
+0.1
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
N.D.
N.D.
-0.1
-0.3
nl-ccm_agar
NL-CCM_agar
+0.4
N.D.
N.D.
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
N.D.
N.D.
+0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
N.D.
N.D.
+0.2
-0.4
mgl
MGL
+0.2
N.D.
N.D.
-0.2
+0.3
mgl
MGL
+0.5
N.D.
N.D.
-0.0
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.6
N.D.
N.D.
+0.0
-0.3
nl-ccm_agar
NL-CCM_agar
+0.3
N.D.
N.D.
+0.2
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.5
N.D.
N.D.
-0.2
+0.0
mgl
MGL
+0.2
N.D.
N.D.
+0.5
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.5
N.D.
N.D.
+0.1
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.4
N.D.
N.D.
+0.3
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.4
N.D.
N.D.
+0.2
-0.0
nl-ccm_agar
NL-CCM_agar
+0.5
N.D.
N.D.
+0.2
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
N.D.
N.D.
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.4
N.D.
N.D.
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.6
N.D.
N.D.
+0.1
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.4
N.D.
N.D.
+0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.7
N.D.
N.D.
+0.1
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
N.D.
N.D.
+0.4
+0.1
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