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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03007 and MPMX19_03008 are separated by 88 nucleotides
MPMX19_03008 and MPMX19_03009 are separated by 148 nucleotides
MPMX19_03009 and MPMX19_03010 are separated by 421 nucleotides
MPMX19_03010 and MPMX19_03011 are separated by 100 nucleotides
MPMX19_03007: MPMX19_03007 - Arabinose import ATP-binding protein AraG, at 269,665 to 271,203
_03007
MPMX19_03008: MPMX19_03008 - hypothetical protein, at 271,292 to 272,239
_03008
MPMX19_03009: MPMX19_03009 - Erythritol catabolism regulatory protein EryD, at 272,388 to 273,374
_03009
MPMX19_03010: MPMX19_03010 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 273,796 to 274,458
_03010
MPMX19_03011: MPMX19_03011 - hypothetical protein, at 274,559 to 275,140
_03011
Group
Condition
MPMX19
_03007
MPMX19
_03008
MPMX19
_03009
MPMX19
_03010
MPMX19
_03011
mgl
MGL
-1.0
-0.5
N.D.
N.D.
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
-0.0
N.D.
N.D.
-0.8
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.8
+0.1
N.D.
N.D.
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.9
+0.0
N.D.
N.D.
-0.3
nl-ccm
NL-CCM, start OD=0.3
-0.6
-0.3
N.D.
N.D.
-0.1
mgl
MGL
-0.4
-0.2
N.D.
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
-0.6
+0.1
N.D.
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
+0.1
N.D.
N.D.
-0.2
nl-ccm
NL-CCM, start OD=0.1
-0.5
+0.1
N.D.
N.D.
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.0
+0.4
N.D.
N.D.
+0.2
mgl
MGL
-0.6
-0.2
N.D.
N.D.
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.3
N.D.
N.D.
-0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
-0.2
N.D.
N.D.
+0.4
nl-ccm_agar
NL-CCM_agar
-0.6
+0.2
N.D.
N.D.
+0.1
nf_with_fulln
NF_with_fullN
-0.3
-0.1
N.D.
N.D.
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
-0.0
N.D.
N.D.
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.6
+0.3
N.D.
N.D.
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.4
N.D.
N.D.
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.5
-0.2
N.D.
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.2
N.D.
N.D.
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
+0.1
N.D.
N.D.
+0.3
mgl
MGL
-0.3
+0.1
N.D.
N.D.
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.2
N.D.
N.D.
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.2
N.D.
N.D.
+0.4
mgl
MGL
-0.3
+0.4
N.D.
N.D.
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.1
N.D.
N.D.
+0.6
nl-ccm
NL-CCM, start OD=0.3
+0.2
+0.0
N.D.
N.D.
+0.4
nln
NLN
+0.1
+0.2
N.D.
N.D.
+0.4
nf
NF
+0.2
-0.0
N.D.
N.D.
+0.6
nf_with_fulln
NF_with_fullN
+0.5
+0.2
N.D.
N.D.
+0.1
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