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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02893 and MPMX19_02894 are separated by 182 nucleotides
MPMX19_02894 and MPMX19_02895 are separated by 311 nucleotides
MPMX19_02895 and MPMX19_02896 are separated by 261 nucleotides
MPMX19_02896 and MPMX19_02897 are separated by 35 nucleotides
MPMX19_02893: MPMX19_02893 - putative glucarate transporter, at 146,433 to 147,821
_02893
MPMX19_02894: MPMX19_02894 - putative 5-dehydro-4-deoxyglucarate dehydratase, at 148,004 to 148,915
_02894
MPMX19_02895: MPMX19_02895 - HTH-type transcriptional regulator LutR, at 149,227 to 149,958
_02895
MPMX19_02896: MPMX19_02896 - Alpha-ketoglutaric semialdehyde dehydrogenase 2, at 150,220 to 151,800
_02896
MPMX19_02897: MPMX19_02897 - hypothetical protein, at 151,836 to 152,960
_02897
Group
Condition
MPMX19
_02893
MPMX19
_02894
MPMX19
_02895
MPMX19
_02896
MPMX19
_02897
mgl
MGL
+0.1
-0.4
N.D.
N.D.
-0.6
mgl
MGL
-0.2
+0.2
N.D.
N.D.
-0.6
nl-ccm_agar
NL-CCM_agar
-0.1
-0.1
N.D.
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.0
N.D.
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.1
N.D.
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
+0.1
N.D.
N.D.
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.2
N.D.
N.D.
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.2
N.D.
N.D.
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.1
N.D.
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
-0.2
N.D.
N.D.
-0.2
nf_with_fulln
NF_with_fullN
-0.3
+0.2
N.D.
N.D.
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.5
N.D.
N.D.
+0.1
nl-ccm_agar
NL-CCM_agar
-0.2
+0.2
N.D.
N.D.
-0.2
mgl
MGL
+0.0
+0.5
N.D.
N.D.
-0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
+0.2
N.D.
N.D.
-0.1
nln
NLN
-0.1
+0.3
N.D.
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.4
N.D.
N.D.
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.2
N.D.
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
+0.3
N.D.
N.D.
-0.3
nl-ccm
NL-CCM, start OD=0.3
+0.0
+0.2
N.D.
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.3
N.D.
N.D.
-0.1
nf_with_fulln
NF_with_fullN
-0.2
+0.2
N.D.
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.2
N.D.
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.2
+0.3
N.D.
N.D.
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.0
N.D.
N.D.
+0.5
mgl
MGL
-0.1
+0.3
N.D.
N.D.
+0.1
nf
NF
+0.0
+0.4
N.D.
N.D.
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.3
N.D.
N.D.
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.0
N.D.
N.D.
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.3
N.D.
N.D.
+0.1
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