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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02885 and MPMX19_02886 are separated by 322 nucleotides
MPMX19_02886 and MPMX19_02887 are separated by 131 nucleotides
MPMX19_02887 and MPMX19_02888 are separated by 183 nucleotides
MPMX19_02888 and MPMX19_02889 are separated by 90 nucleotides
MPMX19_02885: MPMX19_02885 - Citrate transporter, at 134,883 to 136,229
_02885
MPMX19_02886: MPMX19_02886 - HTH-type transcriptional regulator CynR, at 136,552 to 137,484
_02886
MPMX19_02887: MPMX19_02887 - Methyl-accepting chemotaxis protein, at 137,616 to 139,310
_02887
MPMX19_02888: MPMX19_02888 - 6-phosphogluconolactonase, at 139,494 to 140,594
_02888
MPMX19_02889: MPMX19_02889 - Galactarate dehydratase (L-threo-forming), at 140,685 to 142,208
_02889
Group
Condition
MPMX19
_02885
MPMX19
_02886
MPMX19
_02887
MPMX19
_02888
MPMX19
_02889
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.1
-0.0
-0.5
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.2
-0.3
-0.1
-0.0
mgl
MGL
+0.1
-0.3
-0.2
+0.2
-0.1
mgl
MGL
+0.3
-0.2
-0.2
-0.3
+0.1
mgl
MGL
+0.4
-0.5
+0.1
-0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.2
-0.2
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.1
-0.2
-0.1
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.0
+0.0
-0.4
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.3
+0.3
-0.3
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
+0.1
+0.1
-0.4
+0.1
nf
NF
+0.3
-0.1
-0.2
-0.0
+0.2
mgl
MGL
+0.2
-0.0
+0.0
-0.3
+0.3
nf_with_fulln
NF_with_fullN
-0.1
+0.1
-0.3
+0.2
+0.2
mgl
MGL
+0.3
+0.0
+0.2
-0.2
-0.1
nl-ccm_agar
NL-CCM_agar
+0.3
+0.2
-0.0
-0.4
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.4
+0.0
-0.1
-0.2
+0.1
mgl
MGL
+0.4
-0.2
+0.2
-0.5
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.3
+0.2
-0.0
-0.2
+0.1
nln
NLN
+0.3
+0.2
-0.2
+0.0
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
+0.2
-0.0
-0.2
+0.1
nln
NLN
+0.1
+0.3
+0.1
-0.2
+0.2
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.1
-0.0
-0.1
+0.3
nl-ccm_agar
NL-CCM_agar
+0.2
+0.3
-0.1
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.2
+0.3
+0.1
-0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.1
+0.2
-0.0
+0.2
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.4
+0.3
-0.0
+0.1
nln
NLN
+0.1
+0.4
+0.1
+0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.2
+0.2
-0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.0
+0.5
+0.5
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.3
+0.4
+0.6
-0.0
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