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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02833 and MPMX19_02834 overlap by 4 nucleotides
MPMX19_02834 and MPMX19_02835 overlap by 4 nucleotides
MPMX19_02835 and MPMX19_02836 overlap by 14 nucleotides
MPMX19_02836 and MPMX19_02837 are separated by 3 nucleotides
MPMX19_02833: MPMX19_02833 - Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase PksC, at 75,071 to 75,988
_02833
MPMX19_02834: MPMX19_02834 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase, at 75,985 to 76,860
_02834
MPMX19_02835: MPMX19_02835 - Phosphoribosyl-dephospho-CoA transferase, at 76,857 to 77,525
_02835
MPMX19_02836: MPMX19_02836 - hypothetical protein, at 77,512 to 78,216
_02836
MPMX19_02837: MPMX19_02837 - Malonyl-S-ACP:biotin-protein carboxyltransferase MADC, at 78,220 to 79,107
_02837
Group
Condition
MPMX19
_02833
MPMX19
_02834
MPMX19
_02835
MPMX19
_02836
MPMX19
_02837
mgl
MGL
-0.5
-1.2
+0.5
-1.2
N.D.
mgl
MGL
+0.0
-1.8
+0.2
+0.1
N.D.
mgl
MGL
+0.0
-1.2
+0.3
-0.3
N.D.
mgl
MGL
-0.3
-0.5
-0.6
+0.5
N.D.
nf
NF
-0.3
-0.4
-0.1
+0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.6
-0.1
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
-0.4
+0.3
-0.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.2
-0.5
+0.3
N.D.
nf_with_fulln
NF_with_fullN
-0.1
-0.1
+0.4
-0.4
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.3
+0.4
+0.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.3
+0.3
-0.5
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.5
+0.3
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.7
+0.4
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
-0.6
+0.2
+0.2
N.D.
mgl
MGL
+0.0
+0.3
-0.6
+0.3
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.4
+0.2
-0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.4
+0.4
+0.2
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.3
+0.3
+0.0
N.D.
nf_with_fulln
NF_with_fullN
+0.1
+0.3
+0.3
-0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.1
+0.2
+0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.5
+0.1
+0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.5
-0.1
+0.5
-0.1
N.D.
nf_with_fulln
NF_with_fullN
+0.6
+0.1
+0.2
-0.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.4
+0.2
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.1
+0.4
+0.3
N.D.
nln
NLN
+0.2
+0.2
+0.4
+0.2
N.D.
nln
NLN
+0.2
+0.3
+0.4
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.3
+0.8
+0.1
N.D.
nln
NLN
+0.4
+0.1
+0.4
+0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.5
+0.8
+0.1
N.D.
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