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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02829 and MPMX19_02830 are separated by 52 nucleotides
MPMX19_02830 and MPMX19_02831 are separated by 28 nucleotides
MPMX19_02831 and MPMX19_02832 overlap by 4 nucleotides
MPMX19_02832 and MPMX19_02833 are separated by 8 nucleotides
MPMX19_02829: MPMX19_02829 - 2-dehydropantoate 2-reductase, at 70,790 to 71,770
_02829
MPMX19_02830: MPMX19_02830 - N-carbamoyl-L-amino-acid hydrolase, at 71,823 to 73,064
_02830
MPMX19_02831: MPMX19_02831 - Acetylpolyamine amidohydrolase, at 73,093 to 74,157
_02831
MPMX19_02832: MPMX19_02832 - putative cystine transporter YijE, at 74,154 to 75,062
_02832
MPMX19_02833: MPMX19_02833 - Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase PksC, at 75,071 to 75,988
_02833
Group
Condition
MPMX19
_02829
MPMX19
_02830
MPMX19
_02831
MPMX19
_02832
MPMX19
_02833
mgl
MGL
-0.8
-0.5
-0.2
+0.3
-0.3
mgl
MGL
-0.3
-0.1
-0.4
-0.4
+0.0
mgl
MGL
-0.2
-0.5
-0.1
+0.1
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.2
-0.1
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.5
+0.0
+0.0
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
+0.3
-0.2
+0.1
-0.3
mgl
MGL
+0.3
-0.6
+0.4
-0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.0
-0.4
+0.2
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.1
+0.0
-0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.4
+0.2
-0.2
+0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
+0.4
+0.0
+0.2
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.2
-0.2
+0.3
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
+0.2
+0.1
+0.3
-0.3
nl-ccm
NL-CCM, start OD=0.1
-0.3
+0.0
+0.1
+0.5
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.3
-0.3
+0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
-0.3
+0.1
-0.1
+0.2
nf_with_fulln
NF_with_fullN
+0.4
+0.0
-0.2
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.3
+0.1
-0.1
+0.4
-0.2
nf_with_fulln
NF_with_fullN
+0.4
-0.3
-0.1
+0.1
+0.5
mgl
MGL
-0.1
+0.5
+0.4
+0.2
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.2
-0.1
+0.3
+0.2
nln
NLN
+0.2
+0.3
-0.0
-0.0
+0.4
nln
NLN
+0.1
+0.5
+0.0
+0.3
+0.0
nln
NLN
+0.1
+0.2
+0.4
+0.1
+0.2
nln
NLN
+0.4
+0.3
+0.2
+0.0
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.4
+0.2
-0.0
+0.4
+0.1
nln
NLN
+0.2
+0.4
+0.1
+0.2
+0.2
nf_with_fulln
NF_with_fullN
+0.6
-0.0
-0.0
+0.1
+0.6
nf_with_fulln
NF_with_fullN
+0.5
+0.0
+0.2
+0.4
+0.3
nl-ccm
NL-CCM, start OD=0.3
+0.4
+0.4
+0.2
+0.3
+0.1
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