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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02815 and MPMX19_02816 are separated by 14 nucleotides
MPMX19_02816 and MPMX19_02817 are separated by 83 nucleotides
MPMX19_02817 and MPMX19_02818 are separated by 141 nucleotides
MPMX19_02818 and MPMX19_02819 are separated by 3 nucleotides
MPMX19_02815: MPMX19_02815 - 2-keto-4-pentenoate hydratase, at 52,028 to 52,792
_02815
MPMX19_02816: MPMX19_02816 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 52,807 to 53,493
_02816
MPMX19_02817: MPMX19_02817 - Serine 3-dehydrogenase, at 53,577 to 54,365
_02817
MPMX19_02818: MPMX19_02818 - hypothetical protein, at 54,507 to 55,979
_02818
MPMX19_02819: MPMX19_02819 - hypothetical protein, at 55,983 to 56,843
_02819
Group
Condition
MPMX19
_02815
MPMX19
_02816
MPMX19
_02817
MPMX19
_02818
MPMX19
_02819
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-1.2
-0.1
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.5
+0.3
-0.0
N.D.
-0.1
mgl
MGL
-0.7
+0.8
-1.0
N.D.
-0.2
nl-ccm
NL-CCM, start OD=0.3
+0.1
+0.2
-0.7
N.D.
-0.6
mgl
MGL
-0.9
-1.1
+1.2
N.D.
+0.2
nf_with_fulln
NF_with_fullN
+0.2
+0.2
-0.9
N.D.
+0.1
nln
NLN
-0.5
+0.5
-0.4
N.D.
+0.2
nl-ccm_agar
NL-CCM_agar
-0.7
+0.2
+0.1
N.D.
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.8
-0.0
-0.9
N.D.
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.9
-0.2
-0.4
N.D.
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.6
+0.2
-0.4
N.D.
+0.1
mgl
MGL
-0.5
+0.4
+0.4
N.D.
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.2
-0.3
N.D.
+0.7
nl-ccm_agar
NL-CCM_agar
-0.4
+0.5
+0.2
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.3
+0.8
-0.1
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.5
-0.0
+0.5
N.D.
-0.2
nl-ccm
NL-CCM, start OD=0.1
+0.6
+0.3
+0.2
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.8
+0.3
+0.2
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.7
+0.5
-0.3
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.6
+0.9
+0.4
N.D.
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.5
+0.4
N.D.
-0.1
nf_with_fulln
NF_with_fullN
+0.8
+0.4
+0.0
N.D.
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.8
+0.8
+0.3
N.D.
-0.6
nln
NLN
+0.4
+0.5
+0.2
N.D.
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.9
+0.8
-0.2
N.D.
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
+0.7
+0.7
N.D.
-0.2
nf_with_fulln
NF_with_fullN
+0.1
+0.9
+0.1
N.D.
+0.5
mgl
MGL
+0.6
+0.6
+0.4
N.D.
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.5
+0.7
-0.1
N.D.
+0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.8
+0.6
+0.3
N.D.
+0.4
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