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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02808 and MPMX19_02809 are separated by 275 nucleotides
MPMX19_02809 and MPMX19_02810 overlap by 4 nucleotides
MPMX19_02810 and MPMX19_02811 are separated by 11 nucleotides
MPMX19_02811 and MPMX19_02812 are separated by 45 nucleotides
MPMX19_02808: MPMX19_02808 - HTH-type transcriptional repressor NanR, at 43,797 to 44,573
_02808
MPMX19_02809: MPMX19_02809 - D-erythronate kinase, at 44,849 to 46,048
_02809
MPMX19_02810: MPMX19_02810 - D-threonate 4-phosphate dehydrogenase, at 46,045 to 47,079
_02810
MPMX19_02811: MPMX19_02811 - Long-chain-alcohol dehydrogenase 1, at 47,091 to 48,227
_02811
MPMX19_02812: MPMX19_02812 - 4-hydroxy-tetrahydrodipicolinate synthase, at 48,273 to 49,172
_02812
Group
Condition
MPMX19
_02808
MPMX19
_02809
MPMX19
_02810
MPMX19
_02811
MPMX19
_02812
mgl
MGL
N.D.
-0.8
-0.9
-0.4
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-1.0
-0.3
-0.6
-0.4
mgl
MGL
N.D.
-0.8
-0.6
+0.0
-0.2
mgl
MGL
N.D.
+0.2
-1.1
-0.8
+0.3
nf
NF
N.D.
-0.2
+0.1
-0.3
-0.5
mgl
MGL
N.D.
+0.3
-0.0
-1.3
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.6
+0.1
-0.5
+0.1
nl-ccm_agar
NL-CCM_agar
N.D.
-0.6
-0.2
+0.1
-0.1
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.4
+0.1
-0.3
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.7
+0.0
+0.3
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.2
-0.3
-0.3
+0.3
mgl
MGL
N.D.
+0.4
-0.3
-0.5
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.5
-0.2
+0.3
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.5
-0.1
+0.4
-0.1
nf_with_fulln
NF_with_fullN
N.D.
-0.3
-0.2
+0.4
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.9
+0.2
+0.2
+0.2
nln
NLN
N.D.
-0.4
-0.1
+0.5
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.1
-0.3
+0.4
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.7
+0.0
+0.8
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.5
-0.2
+0.6
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.5
-0.2
+0.5
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.2
-0.3
+0.5
+0.0
nln
NLN
N.D.
+0.3
-0.2
+0.5
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.1
+0.1
+0.5
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.0
-0.4
+0.7
+0.2
nf_with_fulln
NF_with_fullN
N.D.
+0.2
-0.4
+1.0
-0.3
nf
NF
N.D.
-0.4
-0.0
+0.7
+0.4
nln
NLN
N.D.
+0.2
-0.2
+0.7
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.1
-0.0
+0.6
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.3
-0.0
+0.7
-0.1
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