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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02787 and MPMX19_02788 are separated by 17 nucleotides
MPMX19_02788 and MPMX19_02789 are separated by 149 nucleotides
MPMX19_02789 and MPMX19_02790 are separated by 98 nucleotides
MPMX19_02790 and MPMX19_02791 are separated by 274 nucleotides
MPMX19_02787: MPMX19_02787 - (R)-benzylsuccinyl-CoA dehydrogenase, at 19,578 to 20,774
_02787
MPMX19_02788: MPMX19_02788 - Gluconate 5-dehydrogenase, at 20,792 to 21,559
_02788
MPMX19_02789: MPMX19_02789 - hypothetical protein, at 21,709 to 22,404
_02789
MPMX19_02790: MPMX19_02790 - Long-chain-fatty-acid--CoA ligase, at 22,503 to 24,110
_02790
MPMX19_02791: MPMX19_02791 - Haloalkane dehalogenase, at 24,385 to 26,001
_02791
Group
Condition
MPMX19
_02787
MPMX19
_02788
MPMX19
_02789
MPMX19
_02790
MPMX19
_02791
mgl
MGL
-1.5
-0.3
-0.1
-0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-1.0
-0.1
-0.0
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.5
+0.1
+0.3
-0.2
mgl
MGL
-1.1
+0.0
+0.1
+0.1
+0.3
nl-ccm
NL-CCM, start OD=0.3
-0.1
-0.5
+0.2
-0.1
-0.0
nf_with_fulln
NF_with_fullN
-0.3
-0.3
+0.2
+0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.3
-0.2
+0.0
+0.1
nf
NF
-0.4
-0.1
+0.1
+0.0
+0.3
nl-ccm_agar
NL-CCM_agar
+0.1
-0.2
-0.1
-0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.4
-0.2
+0.2
-0.7
nf
NF
-0.0
+0.4
-0.1
-0.2
+0.1
mgl
MGL
+0.7
-0.3
-0.1
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.4
-0.1
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.6
+0.2
-0.4
+0.0
+0.0
nl-ccm_agar
NL-CCM_agar
-0.2
+0.3
+0.2
+0.1
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.6
-0.0
-0.1
-0.1
+0.1
mgl
MGL
+0.5
+0.4
-0.1
+0.1
-0.3
nl-ccm
NL-CCM, start OD=0.3
+0.4
+0.3
+0.0
-0.0
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.5
-0.2
+0.0
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.5
+0.1
-0.2
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.5
+0.1
-0.3
+0.2
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.5
-0.0
-0.0
+0.2
+0.2
nl-ccm_agar
NL-CCM_agar
+0.3
+0.2
-0.0
+0.2
+0.3
nln
NLN
+0.4
+0.1
-0.0
+0.2
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.6
+0.3
-0.0
+0.1
+0.0
nln
NLN
+0.5
+0.2
+0.1
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.4
+0.0
+0.1
+0.2
+0.2
nln
NLN
+0.4
+0.1
+0.1
+0.3
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.4
+0.1
+0.0
+0.2
+0.2
mgl
MGL
-0.2
+0.6
+0.4
-0.1
+0.4
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