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Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02781 and MPMX19_02782 are separated by 157 nucleotides
MPMX19_02782 and MPMX19_02783 are separated by 103 nucleotides
MPMX19_02783 and MPMX19_02784 are separated by 12 nucleotides
MPMX19_02784 and MPMX19_02785 overlap by 4 nucleotides
MPMX19_02781: MPMX19_02781 - putative cation-transporting ATPase F, at 12,680 to 15,427
_02781
MPMX19_02782: MPMX19_02782 - 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX, at 15,585 to 16,349
_02782
MPMX19_02783: MPMX19_02783 - HTH-type transcriptional regulator DmlR, at 16,453 to 17,391
_02783
MPMX19_02784: MPMX19_02784 - phosphoglycerate mutase GpmB, at 17,404 to 18,117
_02784
MPMX19_02785: MPMX19_02785 - hypothetical protein, at 18,114 to 18,497
_02785
Group
Condition
MPMX19
_02781
MPMX19
_02782
MPMX19
_02783
MPMX19
_02784
MPMX19
_02785
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.3
-0.1
-0.5
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
+0.3
-0.7
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
-0.2
+0.0
-0.5
N.D.
nf_with_fulln
NF_with_fullN
-0.1
-0.2
+0.1
-0.4
N.D.
mgl
MGL
-0.2
-0.3
-0.0
-0.1
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
-0.5
-0.0
+0.0
N.D.
mgl
MGL
-0.0
-0.4
+0.1
-0.1
N.D.
nf
NF
-0.0
-0.1
+0.1
-0.4
N.D.
mgl
MGL
-0.1
-0.0
+0.1
-0.3
N.D.
nln
NLN
-0.1
-0.1
+0.1
-0.3
N.D.
nln
NLN
+0.0
-0.2
+0.1
-0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.1
+0.1
-0.2
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.3
+0.2
-0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.2
+0.0
-0.3
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
-0.3
+0.1
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
-0.2
-0.1
-0.3
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
-0.3
+0.1
+0.1
N.D.
nf_with_fulln
NF_with_fullN
+0.2
-0.0
-0.1
-0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.2
+0.2
-0.1
N.D.
nf_with_fulln
NF_with_fullN
+0.0
+0.3
-0.1
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.3
+0.1
+0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.0
-0.1
+0.3
N.D.
nl-ccm_agar
NL-CCM_agar
+0.2
-0.2
+0.1
+0.2
N.D.
nf
NF
+0.2
-0.1
-0.1
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.2
+0.3
+0.1
N.D.
mgl
MGL
+0.1
-0.3
+0.6
-0.1
N.D.
nln
NLN
+0.0
+0.2
+0.3
-0.1
N.D.
mgl
MGL
-0.1
+0.0
+0.2
+0.3
N.D.
nl-ccm_agar
NL-CCM_agar
+0.1
-0.2
+0.4
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.1
+0.1
+0.4
N.D.
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